Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm12745-201ENSMUST00000121767 214 ntBASIC9.94□□□□□ -0.82
Clrn1Q8K445 Gm14006-201ENSMUST00000122132 981 ntBASIC9.94□□□□□ -0.82
Clrn1Q8K445 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC9.94□□□□□ -0.82
Clrn1Q8K445 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Clrn1Q8K445 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Clrn1Q8K445 Ccr6-204ENSMUST00000167956 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Clrn1Q8K445 Rn7s6-201ENSMUST00000175005 291 ntBASIC9.94□□□□□ -0.82
Clrn1Q8K445 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC9.94□□□□□ -0.82
Clrn1Q8K445 Igkv2-116-201ENSMUST00000199327 362 ntBASIC9.94□□□□□ -0.82
Clrn1Q8K445 Gm44498-201ENSMUST00000199509 111 ntBASIC9.94□□□□□ -0.82
Clrn1Q8K445 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Clrn1Q8K445 Gm43969-201ENSMUST00000204833 535 ntBASIC9.94□□□□□ -0.82
Clrn1Q8K445 AC134601.2-201ENSMUST00000221071 130 ntBASIC9.94□□□□□ -0.82
Clrn1Q8K445 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Clrn1Q8K445 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Clrn1Q8K445 Olfr169-201ENSMUST00000090062 942 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Clrn1Q8K445 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Clrn1Q8K445 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Clrn1Q8K445 Dcaf12l1-201ENSMUST00000060481 3509 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Clrn1Q8K445 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Clrn1Q8K445 Gm42602-201ENSMUST00000200288 3224 ntBASIC9.94□□□□□ -0.82
Clrn1Q8K445 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC9.94□□□□□ -0.82
Clrn1Q8K445 Gm7967-202ENSMUST00000191042 5042 ntBASIC9.94□□□□□ -0.82
Clrn1Q8K445 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Clrn1Q8K445 Wdr62-201ENSMUST00000108190 4742 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Clrn1Q8K445 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Clrn1Q8K445 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Clrn1Q8K445 Atp8b3-201ENSMUST00000020383 4412 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Clrn1Q8K445 Vma21-201ENSMUST00000114575 4290 ntTSL 2 BASIC9.94□□□□□ -0.82
Clrn1Q8K445 Trpm5-201ENSMUST00000009390 4123 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Clrn1Q8K445 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Clrn1Q8K445 N4bp2-201ENSMUST00000087264 5308 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Clrn1Q8K445 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Clrn1Q8K445 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Clrn1Q8K445 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Clrn1Q8K445 Gm45719-201ENSMUST00000207954 1662 ntBASIC9.93□□□□□ -0.82
Clrn1Q8K445 Stau2-216ENSMUST00000162627 2773 ntTSL 5 BASIC9.93□□□□□ -0.82
Clrn1Q8K445 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Clrn1Q8K445 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Clrn1Q8K445 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Clrn1Q8K445 Itga3-202ENSMUST00000107739 4636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Clrn1Q8K445 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Clrn1Q8K445 Gm44056-201ENSMUST00000204623 1427 ntBASIC9.93□□□□□ -0.82
Clrn1Q8K445 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Clrn1Q8K445 Gm19327-201ENSMUST00000220651 3271 ntBASIC9.93□□□□□ -0.82
Clrn1Q8K445 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Clrn1Q8K445 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Clrn1Q8K445 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Clrn1Q8K445 Gm22937-201ENSMUST00000103954 131 ntBASIC9.93□□□□□ -0.82
Clrn1Q8K445 Lypla1-203ENSMUST00000119612 529 ntTSL 3 BASIC9.93□□□□□ -0.82
Clrn1Q8K445 Gm11544-201ENSMUST00000120215 382 ntBASIC9.93□□□□□ -0.82
Clrn1Q8K445 Gm12990-201ENSMUST00000120372 468 ntBASIC9.93□□□□□ -0.82
Clrn1Q8K445 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Clrn1Q8K445 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Clrn1Q8K445 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC9.93□□□□□ -0.82
Clrn1Q8K445 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC9.93□□□□□ -0.82
Clrn1Q8K445 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Clrn1Q8K445 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Clrn1Q8K445 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC9.93□□□□□ -0.82
Clrn1Q8K445 Gm43249-201ENSMUST00000200464 458 ntBASIC9.93□□□□□ -0.82
Clrn1Q8K445 Gm6352-201ENSMUST00000203583 1134 ntBASIC9.93□□□□□ -0.82
Clrn1Q8K445 Gm43912-201ENSMUST00000204352 538 ntBASIC9.93□□□□□ -0.82
Clrn1Q8K445 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC9.93□□□□□ -0.82
Clrn1Q8K445 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC9.93□□□□□ -0.82
Clrn1Q8K445 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC9.93□□□□□ -0.82
Clrn1Q8K445 AC154407.1-201ENSMUST00000226777 526 ntBASIC9.93□□□□□ -0.82
Clrn1Q8K445 Gm25514-201ENSMUST00000083860 135 ntBASIC9.93□□□□□ -0.82
Clrn1Q8K445 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Clrn1Q8K445 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Clrn1Q8K445 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Clrn1Q8K445 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Clrn1Q8K445 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Clrn1Q8K445 Sipa1l1-210ENSMUST00000222714 6002 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Clrn1Q8K445 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Clrn1Q8K445 Gm37516-201ENSMUST00000192593 1954 ntBASIC9.93□□□□□ -0.82
Clrn1Q8K445 Cyp4x1-202ENSMUST00000106545 4187 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Clrn1Q8K445 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC9.93□□□□□ -0.82
Clrn1Q8K445 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Clrn1Q8K445 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Clrn1Q8K445 Gm38192-201ENSMUST00000194364 1847 ntBASIC9.93□□□□□ -0.82
Clrn1Q8K445 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC9.93□□□□□ -0.82
Clrn1Q8K445 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Clrn1Q8K445 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Clrn1Q8K445 AC122382.1-201ENSMUST00000225869 2371 ntBASIC9.93□□□□□ -0.82
Clrn1Q8K445 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Clrn1Q8K445 Eea1-201ENSMUST00000053484 7749 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Clrn1Q8K445 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Clrn1Q8K445 Plxnb3-201ENSMUST00000002079 6030 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Toe1-201ENSMUST00000030451 2090 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Tmc3-201ENSMUST00000039317 6221 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Scml4-201ENSMUST00000063063 4885 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Ankrd36-201ENSMUST00000109855 1363 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Vwce-201ENSMUST00000055115 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms