Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gli3Q61602 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gli3Q61602 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
Gli3Q61602 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gli3Q61602 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gli3Q61602 Gm17031-201ENSMUST00000016698 1669 ntBASIC13.85□□□□□ -0.19
Gli3Q61602 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.85□□□□□ -0.19
Gli3Q61602 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gli3Q61602 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gli3Q61602 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Gli3Q61602 E130114P18Rik-201ENSMUST00000107067 1092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gli3Q61602 Magea7-ps-201ENSMUST00000117727 960 ntBASIC13.85□□□□□ -0.19
Gli3Q61602 Gm13564-201ENSMUST00000131533 657 ntTSL 3 BASIC13.85□□□□□ -0.19
Gli3Q61602 Gm3534-201ENSMUST00000182522 1001 ntBASIC13.85□□□□□ -0.19
Gli3Q61602 AC157570.2-201ENSMUST00000219091 700 ntBASIC13.85□□□□□ -0.19
Gli3Q61602 Gm46391-201ENSMUST00000220704 203 ntBASIC13.85□□□□□ -0.19
Gli3Q61602 Gm12691-202ENSMUST00000222516 918 ntTSL 5 BASIC13.85□□□□□ -0.19
Gli3Q61602 AC130219.2-201ENSMUST00000228765 807 ntBASIC13.85□□□□□ -0.19
Gli3Q61602 Plac8l1-201ENSMUST00000081374 763 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gli3Q61602 Ttc16-206ENSMUST00000161430 2874 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gli3Q61602 A530006G24Rik-201ENSMUST00000152542 1331 ntTSL 2 BASIC13.85□□□□□ -0.19
Gli3Q61602 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gli3Q61602 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Gli3Q61602 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gli3Q61602 Glod4-209ENSMUST00000170710 1445 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Gli3Q61602 Olfr462-202ENSMUST00000213672 2021 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Gli3Q61602 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gli3Q61602 Toe1-201ENSMUST00000030451 2090 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gli3Q61602 Gm9430-201ENSMUST00000121232 1527 ntBASIC13.85□□□□□ -0.19
Gli3Q61602 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gli3Q61602 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gli3Q61602 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Gli3Q61602 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gli3Q61602 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Gli3Q61602 Gm10398-201ENSMUST00000100826 397 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Gli3Q61602 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.84□□□□□ -0.19
Gli3Q61602 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gli3Q61602 Gm14239-201ENSMUST00000116491 685 ntBASIC13.84□□□□□ -0.19
Gli3Q61602 Gm11489-201ENSMUST00000118342 499 ntBASIC13.84□□□□□ -0.19
Gli3Q61602 Gimap4-203ENSMUST00000118802 771 ntTSL 3 BASIC13.84□□□□□ -0.19
Gli3Q61602 Gm12168-201ENSMUST00000119051 368 ntBASIC13.84□□□□□ -0.19
Gli3Q61602 Gm22198-201ENSMUST00000122659 307 ntBASIC13.84□□□□□ -0.19
Gli3Q61602 Snhg7os-201ENSMUST00000126798 546 ntTSL 5 BASIC13.84□□□□□ -0.19
Gli3Q61602 1700049E15Rik-202ENSMUST00000152737 921 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Gli3Q61602 Ear6-202ENSMUST00000169070 893 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Gli3Q61602 1700009J07Rik-201ENSMUST00000178996 912 ntTSL 5 BASIC13.84□□□□□ -0.19
Gli3Q61602 Gm8449-201ENSMUST00000185532 988 ntBASIC13.84□□□□□ -0.19
Gli3Q61602 Grxcr2-201ENSMUST00000097591 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gli3Q61602 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gli3Q61602 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Gli3Q61602 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gli3Q61602 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gli3Q61602 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gli3Q61602 Gm10408-201ENSMUST00000096168 1512 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Gli3Q61602 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Gli3Q61602 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.84□□□□□ -0.19
Gli3Q61602 Metap2-210ENSMUST00000181217 1984 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Gli3Q61602 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gli3Q61602 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gli3Q61602 Blk-201ENSMUST00000014597 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gli3Q61602 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gli3Q61602 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gli3Q61602 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gli3Q61602 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gli3Q61602 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Gli3Q61602 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.84□□□□□ -0.19
Gli3Q61602 Pla2g2d-202ENSMUST00000105806 1206 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Gli3Q61602 Gm22282-201ENSMUST00000158524 312 ntBASIC13.83□□□□□ -0.19
Gli3Q61602 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Gli3Q61602 Rps10-208ENSMUST00000178774 498 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
Gli3Q61602 Mocs2-210ENSMUST00000183407 1074 ntTSL 5 BASIC13.83□□□□□ -0.19
Gli3Q61602 Gm28677-202ENSMUST00000186904 615 ntBASIC13.83□□□□□ -0.19
Gli3Q61602 Gm29434-201ENSMUST00000187426 260 ntBASIC13.83□□□□□ -0.19
Gli3Q61602 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC13.83□□□□□ -0.19
Gli3Q61602 Gm5857-201ENSMUST00000198953 493 ntBASIC13.83□□□□□ -0.19
Gli3Q61602 Gm45134-201ENSMUST00000206046 1189 ntBASIC13.83□□□□□ -0.19
Gli3Q61602 Ldhc-204ENSMUST00000210585 1071 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Gli3Q61602 Gm38095-201ENSMUST00000192896 1402 ntBASIC13.83□□□□□ -0.19
Gli3Q61602 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC13.83□□□□□ -0.19
Gli3Q61602 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gli3Q61602 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gli3Q61602 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gli3Q61602 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gli3Q61602 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gli3Q61602 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gli3Q61602 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gli3Q61602 Gm21115-201ENSMUST00000187565 2578 ntBASIC13.83□□□□□ -0.2
Gli3Q61602 2900011O08Rik-201ENSMUST00000056521 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gli3Q61602 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gli3Q61602 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gli3Q61602 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Gli3Q61602 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Gli3Q61602 Zfp69-202ENSMUST00000106281 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gli3Q61602 Zfp42-201ENSMUST00000082120 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gli3Q61602 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gli3Q61602 Gm16429-201ENSMUST00000179824 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gli3Q61602 Calr3-202ENSMUST00000109974 1371 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Gli3Q61602 Gm25608-201ENSMUST00000104021 132 ntBASIC13.83□□□□□ -0.2
Gli3Q61602 Gm14654-201ENSMUST00000118620 447 ntBASIC13.83□□□□□ -0.2
Gli3Q61602 Gm11199-201ENSMUST00000118691 507 ntBASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms