Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Hapln3-203ENSMUST00000206092 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 Rfx2-201ENSMUST00000002444 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 Gm35394-201ENSMUST00000196434 3252 ntTSL 5 BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 Mfn2-201ENSMUST00000030884 4341 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 Zbtb26-201ENSMUST00000067043 5267 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 Gbp7-202ENSMUST00000171263 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 Plxdc2-201ENSMUST00000028081 6947 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 Gm5114-201ENSMUST00000108017 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ccbe1Q3MI99 Ehmt1-202ENSMUST00000091348 4615 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Gm26704-201ENSMUST00000181362 2901 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 9930022D16Rik-201ENSMUST00000055404 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 AC133934.1-201ENSMUST00000223052 1761 ntBASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Ehmt1-210ENSMUST00000147147 5953 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Igf2bp2-202ENSMUST00000115379 3078 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Gabrr3-201ENSMUST00000114341 1656 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 B3gntl1-202ENSMUST00000067399 2864 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 6330415B21Rik-201ENSMUST00000204215 2200 ntBASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 C230053D17Rik-201ENSMUST00000214451 2246 ntBASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Usp4-209ENSMUST00000194959 3436 ntAPPRIS ALT1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Gm43366-201ENSMUST00000199829 2655 ntBASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Gm43318-201ENSMUST00000199939 1949 ntBASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Diaph1-201ENSMUST00000025337 5596 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Gm14263-201ENSMUST00000117955 746 ntBASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Gm14130-201ENSMUST00000118417 987 ntBASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Gm13461-201ENSMUST00000120980 662 ntBASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Gzmg-201ENSMUST00000015578 909 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Gm25700-201ENSMUST00000177693 110 ntBASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Gm4812-201ENSMUST00000182847 993 ntBASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Gm28450-201ENSMUST00000187349 638 ntBASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 1700063K16Rik-202ENSMUST00000191341 952 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Gm19091-201ENSMUST00000208120 978 ntBASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Gm7594-201ENSMUST00000218595 871 ntBASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Cldn12-207ENSMUST00000179804 3752 ntAPPRIS P1 TSL 3 BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Osbpl9-218ENSMUST00000162787 2408 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Stxbp5l-203ENSMUST00000114780 3476 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 CU062626.3-201ENSMUST00000225522 1411 ntBASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Tbck-202ENSMUST00000169172 6578 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 N4bp2-201ENSMUST00000087264 5308 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 4933416O17Rik-201ENSMUST00000220972 2122 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 9330136K24Rik-201ENSMUST00000180842 2478 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Gm37039-201ENSMUST00000193733 2485 ntBASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Gm31182-201ENSMUST00000219061 2391 ntTSL 5 BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Nr3c1-202ENSMUST00000097592 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ccbe1Q3MI99 Ect2l-203ENSMUST00000207827 2730 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Ccbe1Q3MI99 Zfp469-202ENSMUST00000187142 3082 ntBASIC9.54□□□□□ -0.88
Ccbe1Q3MI99 Gpr85-202ENSMUST00000115491 2165 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Ccbe1Q3MI99 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ccbe1Q3MI99 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
Ccbe1Q3MI99 Sh3tc1-207ENSMUST00000201511 4246 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ccbe1Q3MI99 Pi4ka-211ENSMUST00000154364 6630 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ccbe1Q3MI99 Pogk-206ENSMUST00000169324 7034 ntAPPRIS ALT2 TSL 3 BASIC9.54□□□□□ -0.88
Ccbe1Q3MI99 Zfp189-201ENSMUST00000042964 2835 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
Ccbe1Q3MI99 Calr4-201ENSMUST00000030285 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ccbe1Q3MI99 Unc45b-205ENSMUST00000164945 3555 ntAPPRIS ALT1 TSL 5 BASIC9.54□□□□□ -0.88
Ccbe1Q3MI99 Gm26601-201ENSMUST00000181427 3551 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Ccbe1Q3MI99 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC9.54□□□□□ -0.88
Ccbe1Q3MI99 Ttll8-201ENSMUST00000109371 2968 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ccbe1Q3MI99 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Ccbe1Q3MI99 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC9.54□□□□□ -0.88
Ccbe1Q3MI99 Gm15276-201ENSMUST00000145953 498 ntBASIC9.54□□□□□ -0.88
Ccbe1Q3MI99 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Ccbe1Q3MI99 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ccbe1Q3MI99 Gm20426-201ENSMUST00000173657 440 ntBASIC9.54□□□□□ -0.88
Ccbe1Q3MI99 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC9.54□□□□□ -0.88
Ccbe1Q3MI99 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC9.54□□□□□ -0.88
Ccbe1Q3MI99 Gm27046-201ENSMUST00000182160 463 ntBASIC9.54□□□□□ -0.88
Ccbe1Q3MI99 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC9.54□□□□□ -0.88
Ccbe1Q3MI99 AA914427-201ENSMUST00000193194 1166 ntBASIC9.54□□□□□ -0.88
Ccbe1Q3MI99 AC152922.1-201ENSMUST00000216518 1232 ntBASIC9.54□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms