Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Gm18165-201ENSMUST00000217426 928 ntBASIC9.41□□□□□ -0.9
H3f3aP84244 Gm7959-201ENSMUST00000221823 1078 ntBASIC9.41□□□□□ -0.9
H3f3aP84244 AC154184.3-201ENSMUST00000225620 1090 ntBASIC9.41□□□□□ -0.9
H3f3aP84244 AC161172.1-201ENSMUST00000227801 486 ntBASIC9.41□□□□□ -0.9
H3f3aP84244 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
H3f3aP84244 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
H3f3aP84244 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
H3f3aP84244 Gm25514-201ENSMUST00000083860 135 ntBASIC9.41□□□□□ -0.9
H3f3aP84244 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
H3f3aP84244 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
H3f3aP84244 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
H3f3aP84244 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
H3f3aP84244 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
H3f3aP84244 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
H3f3aP84244 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
H3f3aP84244 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
H3f3aP84244 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
H3f3aP84244 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
H3f3aP84244 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
H3f3aP84244 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
H3f3aP84244 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
H3f3aP84244 Gm15604-201ENSMUST00000118350 1456 ntBASIC9.4□□□□□ -0.9
H3f3aP84244 Gm13169-201ENSMUST00000122090 1459 ntBASIC9.4□□□□□ -0.9
H3f3aP84244 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
H3f3aP84244 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC9.4□□□□□ -0.9
H3f3aP84244 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
H3f3aP84244 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
H3f3aP84244 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
H3f3aP84244 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
H3f3aP84244 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
H3f3aP84244 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
H3f3aP84244 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC9.4□□□□□ -0.9
H3f3aP84244 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
H3f3aP84244 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
H3f3aP84244 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
H3f3aP84244 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC9.4□□□□□ -0.9
H3f3aP84244 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
H3f3aP84244 Mkrn2os-202ENSMUST00000112957 964 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
H3f3aP84244 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
H3f3aP84244 Gm12947-201ENSMUST00000116114 420 ntBASIC9.4□□□□□ -0.9
H3f3aP84244 Gm14213-201ENSMUST00000119778 768 ntBASIC9.4□□□□□ -0.9
H3f3aP84244 Gm25288-201ENSMUST00000122800 265 ntBASIC9.4□□□□□ -0.9
H3f3aP84244 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC9.4□□□□□ -0.9
H3f3aP84244 Gm16441-201ENSMUST00000138176 924 ntBASIC9.4□□□□□ -0.9
H3f3aP84244 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC9.4□□□□□ -0.9
H3f3aP84244 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC9.4□□□□□ -0.9
H3f3aP84244 Gm6038-201ENSMUST00000154310 948 ntBASIC9.4□□□□□ -0.9
H3f3aP84244 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC9.4□□□□□ -0.9
H3f3aP84244 Ighv2-1-201ENSMUST00000170946 353 ntBASIC9.4□□□□□ -0.9
H3f3aP84244 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
H3f3aP84244 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC9.4□□□□□ -0.9
H3f3aP84244 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC9.4□□□□□ -0.9
H3f3aP84244 Gm42751-201ENSMUST00000198065 559 ntBASIC9.4□□□□□ -0.9
H3f3aP84244 Gm43506-201ENSMUST00000200675 753 ntBASIC9.4□□□□□ -0.9
H3f3aP84244 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC9.4□□□□□ -0.9
H3f3aP84244 Gm35713-201ENSMUST00000210516 199 ntBASIC9.4□□□□□ -0.9
H3f3aP84244 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
H3f3aP84244 AC168279.1-201ENSMUST00000214611 382 ntBASIC9.4□□□□□ -0.9
H3f3aP84244 BC106175-202ENSMUST00000219344 1213 ntBASIC9.4□□□□□ -0.9
H3f3aP84244 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
H3f3aP84244 CT573086.4-201ENSMUST00000226729 342 ntBASIC9.4□□□□□ -0.9
H3f3aP84244 Gm4604-201ENSMUST00000025040 390 ntBASIC9.4□□□□□ -0.9
H3f3aP84244 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
H3f3aP84244 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
H3f3aP84244 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
H3f3aP84244 Ccr6-202ENSMUST00000164411 1553 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
H3f3aP84244 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
H3f3aP84244 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
H3f3aP84244 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
H3f3aP84244 Gm7052-201ENSMUST00000167568 1512 ntBASIC9.4□□□□□ -0.91
H3f3aP84244 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
H3f3aP84244 Gm43625-201ENSMUST00000199177 1539 ntBASIC9.4□□□□□ -0.91
H3f3aP84244 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
H3f3aP84244 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
H3f3aP84244 Gm11470-201ENSMUST00000118868 1475 ntBASIC9.4□□□□□ -0.91
H3f3aP84244 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
H3f3aP84244 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC9.4□□□□□ -0.91
H3f3aP84244 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
H3f3aP84244 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
H3f3aP84244 Toe1-201ENSMUST00000030451 2090 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
H3f3aP84244 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
H3f3aP84244 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
H3f3aP84244 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
H3f3aP84244 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
H3f3aP84244 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
H3f3aP84244 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
H3f3aP84244 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC9.39□□□□□ -0.91
H3f3aP84244 Gm28693-201ENSMUST00000189622 2638 ntBASIC9.39□□□□□ -0.91
H3f3aP84244 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
H3f3aP84244 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
H3f3aP84244 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
H3f3aP84244 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
H3f3aP84244 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC9.39□□□□□ -0.91
H3f3aP84244 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
H3f3aP84244 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC9.39□□□□□ -0.91
H3f3aP84244 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
H3f3aP84244 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
H3f3aP84244 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
H3f3aP84244 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
H3f3aP84244 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms