Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
LtbrP50284 Gm23884-201ENSMUST00000122687 294 ntBASIC12.74□□□□□ -0.37
LtbrP50284 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC12.74□□□□□ -0.37
LtbrP50284 Gm15258-201ENSMUST00000153801 741 ntBASIC12.74□□□□□ -0.37
LtbrP50284 Gm23432-201ENSMUST00000157181 131 ntBASIC12.74□□□□□ -0.37
LtbrP50284 Gm26610-201ENSMUST00000181529 1024 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LtbrP50284 Gm28671-201ENSMUST00000187036 692 ntBASIC12.74□□□□□ -0.37
LtbrP50284 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC12.74□□□□□ -0.37
LtbrP50284 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LtbrP50284 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
LtbrP50284 Prmt1-214ENSMUST00000209124 741 ntTSL 5 BASIC12.74□□□□□ -0.37
LtbrP50284 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LtbrP50284 AC132384.2-201ENSMUST00000218018 526 ntBASIC12.74□□□□□ -0.37
LtbrP50284 AC122891.1-201ENSMUST00000218671 268 ntBASIC12.74□□□□□ -0.37
LtbrP50284 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LtbrP50284 AC158392.1-201ENSMUST00000223720 1069 ntBASIC12.74□□□□□ -0.37
LtbrP50284 AC133517.1-201ENSMUST00000225825 594 ntBASIC12.74□□□□□ -0.37
LtbrP50284 AC154484.1-201ENSMUST00000227311 771 ntBASIC12.74□□□□□ -0.37
LtbrP50284 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LtbrP50284 Clec1b-201ENSMUST00000032262 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
LtbrP50284 Krtap13-201ENSMUST00000053149 882 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
LtbrP50284 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
LtbrP50284 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LtbrP50284 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
LtbrP50284 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
LtbrP50284 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
LtbrP50284 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LtbrP50284 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LtbrP50284 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
LtbrP50284 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LtbrP50284 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LtbrP50284 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LtbrP50284 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LtbrP50284 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
LtbrP50284 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LtbrP50284 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LtbrP50284 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LtbrP50284 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.73□□□□□ -0.37
LtbrP50284 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC12.73□□□□□ -0.37
LtbrP50284 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
LtbrP50284 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LtbrP50284 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LtbrP50284 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LtbrP50284 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LtbrP50284 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LtbrP50284 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LtbrP50284 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LtbrP50284 Gm37891-201ENSMUST00000195585 1326 ntBASIC12.73□□□□□ -0.37
LtbrP50284 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LtbrP50284 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LtbrP50284 Cst10-202ENSMUST00000109938 729 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
LtbrP50284 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC12.73□□□□□ -0.37
LtbrP50284 Gm13777-201ENSMUST00000118208 345 ntBASIC12.73□□□□□ -0.37
LtbrP50284 Gm15103-201ENSMUST00000119893 871 ntBASIC12.73□□□□□ -0.37
LtbrP50284 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC12.73□□□□□ -0.37
LtbrP50284 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LtbrP50284 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC12.73□□□□□ -0.37
LtbrP50284 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC12.73□□□□□ -0.37
LtbrP50284 Gm20091-201ENSMUST00000179683 189 ntBASIC12.73□□□□□ -0.37
LtbrP50284 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
LtbrP50284 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
LtbrP50284 Gm5342-201ENSMUST00000181982 1003 ntBASIC12.73□□□□□ -0.37
LtbrP50284 Gm4960-201ENSMUST00000182928 1001 ntBASIC12.73□□□□□ -0.37
LtbrP50284 Gm27168-201ENSMUST00000183394 361 ntTSL 3 BASIC12.73□□□□□ -0.37
LtbrP50284 Gm37597-201ENSMUST00000191853 382 ntBASIC12.73□□□□□ -0.37
LtbrP50284 Gm38154-201ENSMUST00000195444 340 ntBASIC12.73□□□□□ -0.37
LtbrP50284 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC12.73□□□□□ -0.37
LtbrP50284 Gm19885-201ENSMUST00000212853 343 ntBASIC12.73□□□□□ -0.37
LtbrP50284 AC132237.2-201ENSMUST00000221702 1209 ntBASIC12.73□□□□□ -0.37
LtbrP50284 Gm3926-201ENSMUST00000223378 1123 ntBASIC12.73□□□□□ -0.37
LtbrP50284 AC159196.1-201ENSMUST00000225524 377 ntBASIC12.73□□□□□ -0.37
LtbrP50284 CT025618.1-203ENSMUST00000227008 589 ntBASIC12.73□□□□□ -0.37
LtbrP50284 Cst10-201ENSMUST00000047008 804 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LtbrP50284 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
LtbrP50284 Lyrm2-201ENSMUST00000062802 465 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LtbrP50284 Rps18-201ENSMUST00000008812 600 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LtbrP50284 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
LtbrP50284 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LtbrP50284 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
LtbrP50284 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
LtbrP50284 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LtbrP50284 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LtbrP50284 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LtbrP50284 Gm44090-201ENSMUST00000204669 1834 ntBASIC12.73□□□□□ -0.37
LtbrP50284 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LtbrP50284 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.73□□□□□ -0.37
LtbrP50284 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LtbrP50284 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LtbrP50284 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LtbrP50284 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LtbrP50284 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LtbrP50284 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LtbrP50284 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LtbrP50284 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LtbrP50284 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LtbrP50284 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LtbrP50284 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LtbrP50284 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LtbrP50284 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LtbrP50284 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms