Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vcam1P29533 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vcam1P29533 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Vcam1P29533 Ifitm7-202ENSMUST00000178021 1823 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Vcam1P29533 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vcam1P29533 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Vcam1P29533 Pax5-202ENSMUST00000102932 1460 ntTSL 5 BASIC12.08□□□□□ -0.47
Vcam1P29533 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Vcam1P29533 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Vcam1P29533 Igsf5-201ENSMUST00000000163 1851 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vcam1P29533 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Vcam1P29533 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vcam1P29533 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vcam1P29533 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Vcam1P29533 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vcam1P29533 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC12.08□□□□□ -0.48
Vcam1P29533 D030068K23Rik-203ENSMUST00000181098 1399 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vcam1P29533 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vcam1P29533 Gm37368-201ENSMUST00000193173 3212 ntBASIC12.08□□□□□ -0.48
Vcam1P29533 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Vcam1P29533 Cers3-201ENSMUST00000066475 3250 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vcam1P29533 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.08□□□□□ -0.48
Vcam1P29533 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC12.08□□□□□ -0.48
Vcam1P29533 Gm14034-201ENSMUST00000120147 551 ntBASIC12.08□□□□□ -0.48
Vcam1P29533 Gm15373-201ENSMUST00000121495 214 ntBASIC12.08□□□□□ -0.48
Vcam1P29533 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Vcam1P29533 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC12.08□□□□□ -0.48
Vcam1P29533 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC12.08□□□□□ -0.48
Vcam1P29533 Gm6967-201ENSMUST00000182599 1007 ntBASIC12.08□□□□□ -0.48
Vcam1P29533 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Vcam1P29533 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Vcam1P29533 Gm32098-201ENSMUST00000211305 479 ntTSL 5 BASIC12.08□□□□□ -0.48
Vcam1P29533 AC127583.1-201ENSMUST00000224351 540 ntBASIC12.08□□□□□ -0.48
Vcam1P29533 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vcam1P29533 Vmn1r199-201ENSMUST00000091732 1104 ntAPPRIS P2 BASIC12.08□□□□□ -0.48
Vcam1P29533 Mak-203ENSMUST00000165087 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vcam1P29533 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vcam1P29533 Arg2-201ENSMUST00000021550 1428 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vcam1P29533 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vcam1P29533 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vcam1P29533 Car13-201ENSMUST00000029071 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vcam1P29533 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vcam1P29533 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vcam1P29533 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vcam1P29533 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC12.08□□□□□ -0.48
Vcam1P29533 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vcam1P29533 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vcam1P29533 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vcam1P29533 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vcam1P29533 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Vcam1P29533 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vcam1P29533 Zfp42-201ENSMUST00000082120 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vcam1P29533 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC12.07□□□□□ -0.48
Vcam1P29533 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vcam1P29533 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vcam1P29533 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Vcam1P29533 Eddm3b-201ENSMUST00000100645 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vcam1P29533 Masp2-202ENSMUST00000105701 738 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vcam1P29533 Lyrm1-204ENSMUST00000106518 875 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Vcam1P29533 S100a16-205ENSMUST00000107334 879 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Vcam1P29533 Cst10-202ENSMUST00000109938 729 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Vcam1P29533 Gm13197-201ENSMUST00000117204 225 ntBASIC12.07□□□□□ -0.48
Vcam1P29533 Fgf1-203ENSMUST00000117566 418 ntTSL 5 BASIC12.07□□□□□ -0.48
Vcam1P29533 Gm14571-201ENSMUST00000118292 570 ntBASIC12.07□□□□□ -0.48
Vcam1P29533 Gm12733-201ENSMUST00000119871 767 ntBASIC12.07□□□□□ -0.48
Vcam1P29533 Smt3h2-ps2-201ENSMUST00000122370 288 ntBASIC12.07□□□□□ -0.48
Vcam1P29533 Gm14370-201ENSMUST00000122460 868 ntBASIC12.07□□□□□ -0.48
Vcam1P29533 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC12.07□□□□□ -0.48
Vcam1P29533 Gm13554-201ENSMUST00000137349 477 ntTSL 5 BASIC12.07□□□□□ -0.48
Vcam1P29533 Gm13898-201ENSMUST00000141865 610 ntBASIC12.07□□□□□ -0.48
Vcam1P29533 Rnasek-203ENSMUST00000141880 465 ntTSL 2 BASIC12.07□□□□□ -0.48
Vcam1P29533 Gm15273-201ENSMUST00000142302 868 ntBASIC12.07□□□□□ -0.48
Vcam1P29533 Gm7023-201ENSMUST00000147295 868 ntBASIC12.07□□□□□ -0.48
Vcam1P29533 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vcam1P29533 Gm5873-201ENSMUST00000177157 1066 ntBASIC12.07□□□□□ -0.48
Vcam1P29533 Gm14357-201ENSMUST00000178352 868 ntBASIC12.07□□□□□ -0.48
Vcam1P29533 Gm14361-201ENSMUST00000178547 868 ntBASIC12.07□□□□□ -0.48
Vcam1P29533 Gm14348-201ENSMUST00000179183 868 ntBASIC12.07□□□□□ -0.48
Vcam1P29533 Zfp572-201ENSMUST00000183674 1098 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vcam1P29533 Med11-201ENSMUST00000019067 902 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vcam1P29533 1700019D03Rik-206ENSMUST00000190831 653 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Vcam1P29533 Gm37009-201ENSMUST00000193297 361 ntBASIC12.07□□□□□ -0.48
Vcam1P29533 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vcam1P29533 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vcam1P29533 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.07□□□□□ -0.48
Vcam1P29533 Gm18749-201ENSMUST00000222410 692 ntBASIC12.07□□□□□ -0.48
Vcam1P29533 Arhgef33-207ENSMUST00000224966 490 ntBASIC12.07□□□□□ -0.48
Vcam1P29533 AC121357.1-201ENSMUST00000227365 608 ntBASIC12.07□□□□□ -0.48
Vcam1P29533 Plbd1-201ENSMUST00000032336 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vcam1P29533 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vcam1P29533 Cst10-201ENSMUST00000047008 804 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vcam1P29533 Gm9790-201ENSMUST00000054148 288 ntBASIC12.07□□□□□ -0.48
Vcam1P29533 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vcam1P29533 Gm4883-201ENSMUST00000085702 528 ntBASIC12.07□□□□□ -0.48
Vcam1P29533 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vcam1P29533 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vcam1P29533 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC12.07□□□□□ -0.48
Vcam1P29533 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC12.07□□□□□ -0.48
Vcam1P29533 Gm14858-201ENSMUST00000138614 1758 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vcam1P29533 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms