Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Hoxd3P09027 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Hoxd3P09027 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Hoxd3P09027 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Hoxd3P09027 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Hoxd3P09027 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Hoxd3P09027 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Hoxd3P09027 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Hoxd3P09027 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC8.63□□□□□ -1.03
Hoxd3P09027 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Hoxd3P09027 Gm37651-201ENSMUST00000194679 1494 ntBASIC8.63□□□□□ -1.03
Hoxd3P09027 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Hoxd3P09027 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Hoxd3P09027 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC8.63□□□□□ -1.03
Hoxd3P09027 Gm44663-201ENSMUST00000206898 3150 ntBASIC8.63□□□□□ -1.03
Hoxd3P09027 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Hoxd3P09027 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC8.63□□□□□ -1.03
Hoxd3P09027 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Hoxd3P09027 Gm12097-201ENSMUST00000121523 1414 ntBASIC8.63□□□□□ -1.03
Hoxd3P09027 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Hoxd3P09027 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
Hoxd3P09027 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd3P09027 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd3P09027 Gm42879-201ENSMUST00000198656 2214 ntBASIC8.62□□□□□ -1.03
Hoxd3P09027 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd3P09027 Gm43127-201ENSMUST00000195890 2789 ntBASIC8.62□□□□□ -1.03
Hoxd3P09027 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC8.62□□□□□ -1.03
Hoxd3P09027 Gm42498-201ENSMUST00000199981 1372 ntBASIC8.62□□□□□ -1.03
Hoxd3P09027 Gm45263-201ENSMUST00000210377 1375 ntBASIC8.62□□□□□ -1.03
Hoxd3P09027 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd3P09027 Serpinb1a-201ENSMUST00000076352 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd3P09027 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd3P09027 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd3P09027 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd3P09027 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd3P09027 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC8.62□□□□□ -1.03
Hoxd3P09027 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd3P09027 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd3P09027 Gm45496-201ENSMUST00000209918 2917 ntBASIC8.62□□□□□ -1.03
Hoxd3P09027 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd3P09027 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd3P09027 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd3P09027 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd3P09027 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Hoxd3P09027 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC8.62□□□□□ -1.03
Hoxd3P09027 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd3P09027 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Hoxd3P09027 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC8.62□□□□□ -1.03
Hoxd3P09027 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC8.62□□□□□ -1.03
Hoxd3P09027 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC8.62□□□□□ -1.03
Hoxd3P09027 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC8.62□□□□□ -1.03
Hoxd3P09027 Mup-ps29-201ENSMUST00000122281 202 ntBASIC8.62□□□□□ -1.03
Hoxd3P09027 Gm25047-201ENSMUST00000122667 104 ntBASIC8.62□□□□□ -1.03
Hoxd3P09027 Gm11817-201ENSMUST00000155578 685 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd3P09027 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC8.62□□□□□ -1.03
Hoxd3P09027 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Hoxd3P09027 Gm22877-201ENSMUST00000175451 105 ntBASIC8.62□□□□□ -1.03
Hoxd3P09027 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC8.62□□□□□ -1.03
Hoxd3P09027 Gm27817-201ENSMUST00000184302 233 ntBASIC8.62□□□□□ -1.03
Hoxd3P09027 Mrip-ps-201ENSMUST00000184613 940 ntBASIC8.62□□□□□ -1.03
Hoxd3P09027 Gm4753-201ENSMUST00000188327 1255 ntBASIC8.62□□□□□ -1.03
Hoxd3P09027 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC8.62□□□□□ -1.03
Hoxd3P09027 Gm28833-201ENSMUST00000189671 559 ntBASIC8.62□□□□□ -1.03
Hoxd3P09027 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd3P09027 Gm37614-201ENSMUST00000195645 210 ntBASIC8.62□□□□□ -1.03
Hoxd3P09027 Gm43708-201ENSMUST00000198857 961 ntBASIC8.62□□□□□ -1.03
Hoxd3P09027 Gm18422-201ENSMUST00000203663 1032 ntBASIC8.62□□□□□ -1.03
Hoxd3P09027 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd3P09027 Gm18598-201ENSMUST00000207724 597 ntBASIC8.62□□□□□ -1.03
Hoxd3P09027 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC8.62□□□□□ -1.03
Hoxd3P09027 Gm7082-201ENSMUST00000209880 969 ntBASIC8.62□□□□□ -1.03
Hoxd3P09027 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd3P09027 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd3P09027 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd3P09027 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC8.62□□□□□ -1.03
Hoxd3P09027 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC8.62□□□□□ -1.03
Hoxd3P09027 AC167192.4-201ENSMUST00000224087 993 ntBASIC8.62□□□□□ -1.03
Hoxd3P09027 AC154747.1-201ENSMUST00000225265 239 ntBASIC8.62□□□□□ -1.03
Hoxd3P09027 AC154305.2-201ENSMUST00000225813 901 ntBASIC8.62□□□□□ -1.03
Hoxd3P09027 AC163664.1-201ENSMUST00000226251 1248 ntBASIC8.62□□□□□ -1.03
Hoxd3P09027 AC099645.1-201ENSMUST00000226476 1105 ntBASIC8.62□□□□□ -1.03
Hoxd3P09027 AC137950.3-201ENSMUST00000228250 246 ntBASIC8.62□□□□□ -1.03
Hoxd3P09027 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd3P09027 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd3P09027 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd3P09027 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd3P09027 Gm8420-201ENSMUST00000097103 598 ntBASIC8.62□□□□□ -1.03
Hoxd3P09027 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd3P09027 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd3P09027 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd3P09027 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd3P09027 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Hoxd3P09027 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd3P09027 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd3P09027 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd3P09027 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd3P09027 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd3P09027 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd3P09027 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd3P09027 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms