Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC14.44□□□□□ -0.1
Usp40Q8BWR4 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp40Q8BWR4 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp40Q8BWR4 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp40Q8BWR4 Gm37516-201ENSMUST00000192593 1954 ntBASIC14.43□□□□□ -0.1
Usp40Q8BWR4 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp40Q8BWR4 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Usp40Q8BWR4 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp40Q8BWR4 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp40Q8BWR4 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp40Q8BWR4 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Usp40Q8BWR4 Gm14853-201ENSMUST00000116081 549 ntBASIC14.43□□□□□ -0.1
Usp40Q8BWR4 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC14.43□□□□□ -0.1
Usp40Q8BWR4 Gm15602-201ENSMUST00000116162 465 ntBASIC14.43□□□□□ -0.1
Usp40Q8BWR4 Shf-205ENSMUST00000121237 882 ntTSL 3 BASIC14.43□□□□□ -0.1
Usp40Q8BWR4 Maats1os-201ENSMUST00000133496 326 ntTSL 3 BASIC14.43□□□□□ -0.1
Usp40Q8BWR4 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC14.43□□□□□ -0.1
Usp40Q8BWR4 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC14.43□□□□□ -0.1
Usp40Q8BWR4 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC14.43□□□□□ -0.1
Usp40Q8BWR4 Gm27241-201ENSMUST00000183517 622 ntTSL 3 BASIC14.43□□□□□ -0.1
Usp40Q8BWR4 Mir6360-201ENSMUST00000184278 126 ntBASIC14.43□□□□□ -0.1
Usp40Q8BWR4 E330020D12Rik-203ENSMUST00000188717 766 ntTSL 2 BASIC14.43□□□□□ -0.1
Usp40Q8BWR4 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Usp40Q8BWR4 CT025642.1-201ENSMUST00000224734 1219 ntBASIC14.43□□□□□ -0.1
Usp40Q8BWR4 Myl10-201ENSMUST00000005611 688 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp40Q8BWR4 AC125351.1-201ENSMUST00000221438 2223 ntBASIC14.43□□□□□ -0.1
Usp40Q8BWR4 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp40Q8BWR4 Gm10406-201ENSMUST00000100895 1813 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Usp40Q8BWR4 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Usp40Q8BWR4 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Usp40Q8BWR4 Gm37368-201ENSMUST00000193173 3212 ntBASIC14.43□□□□□ -0.1
Usp40Q8BWR4 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp40Q8BWR4 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp40Q8BWR4 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usp40Q8BWR4 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp40Q8BWR4 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC14.42□□□□□ -0.1
Usp40Q8BWR4 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usp40Q8BWR4 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp40Q8BWR4 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp40Q8BWR4 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC14.42□□□□□ -0.1
Usp40Q8BWR4 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.42□□□□□ -0.1
Usp40Q8BWR4 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp40Q8BWR4 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp40Q8BWR4 Gm23061-201ENSMUST00000102348 116 ntBASIC14.42□□□□□ -0.1
Usp40Q8BWR4 Gm15132-201ENSMUST00000118581 652 ntBASIC14.42□□□□□ -0.1
Usp40Q8BWR4 Gm8864-201ENSMUST00000118653 1010 ntBASIC14.42□□□□□ -0.1
Usp40Q8BWR4 Gm16480-201ENSMUST00000120439 832 ntBASIC14.42□□□□□ -0.1
Usp40Q8BWR4 Zfp961-204ENSMUST00000136516 601 ntTSL 2 BASIC14.42□□□□□ -0.1
Usp40Q8BWR4 Gm8828-201ENSMUST00000196786 1290 ntBASIC14.42□□□□□ -0.1
Usp40Q8BWR4 Gm43866-201ENSMUST00000203894 839 ntBASIC14.42□□□□□ -0.1
Usp40Q8BWR4 AC100406.1-201ENSMUST00000217305 480 ntBASIC14.42□□□□□ -0.1
Usp40Q8BWR4 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp40Q8BWR4 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usp40Q8BWR4 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Usp40Q8BWR4 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp40Q8BWR4 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp40Q8BWR4 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Usp40Q8BWR4 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp40Q8BWR4 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp40Q8BWR4 Gm8968-201ENSMUST00000199133 1303 ntBASIC14.41□□□□□ -0.1
Usp40Q8BWR4 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp40Q8BWR4 Gsg1-204ENSMUST00000111911 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp40Q8BWR4 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp40Q8BWR4 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp40Q8BWR4 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp40Q8BWR4 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp40Q8BWR4 Casp14-201ENSMUST00000005488 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp40Q8BWR4 Olfr30-202ENSMUST00000215691 2404 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Usp40Q8BWR4 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp40Q8BWR4 Ighv8-6-201ENSMUST00000103524 301 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Usp40Q8BWR4 Gm24471-201ENSMUST00000104485 131 ntBASIC14.41□□□□□ -0.1
Usp40Q8BWR4 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Usp40Q8BWR4 Scgb1b29-201ENSMUST00000108094 282 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp40Q8BWR4 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC14.41□□□□□ -0.1
Usp40Q8BWR4 Gm16581-201ENSMUST00000160730 991 ntBASIC14.41□□□□□ -0.1
Usp40Q8BWR4 Gm7251-201ENSMUST00000182661 1009 ntBASIC14.41□□□□□ -0.1
Usp40Q8BWR4 BB187690-201ENSMUST00000198619 1176 ntBASIC14.41□□□□□ -0.1
Usp40Q8BWR4 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp40Q8BWR4 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp40Q8BWR4 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp40Q8BWR4 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp40Q8BWR4 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp40Q8BWR4 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp40Q8BWR4 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp40Q8BWR4 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp40Q8BWR4 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp40Q8BWR4 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp40Q8BWR4 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp40Q8BWR4 Cd247-202ENSMUST00000027849 1317 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp40Q8BWR4 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp40Q8BWR4 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC14.4□□□□□ -0.1
Usp40Q8BWR4 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp40Q8BWR4 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp40Q8BWR4 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Usp40Q8BWR4 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp40Q8BWR4 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Usp40Q8BWR4 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp40Q8BWR4 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp40Q8BWR4 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp40Q8BWR4 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms