Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC12.65□□□□□ -0.38
Vps54Q5SPW0 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps54Q5SPW0 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC12.65□□□□□ -0.38
Vps54Q5SPW0 Gm13827-201ENSMUST00000148801 372 ntBASIC12.65□□□□□ -0.38
Vps54Q5SPW0 1700001J04Rik-202ENSMUST00000154037 743 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vps54Q5SPW0 Ubl5-203ENSMUST00000160124 501 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Vps54Q5SPW0 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps54Q5SPW0 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps54Q5SPW0 Gm5621-201ENSMUST00000187303 640 ntBASIC12.65□□□□□ -0.38
Vps54Q5SPW0 Gm5254-201ENSMUST00000188353 977 ntBASIC12.65□□□□□ -0.38
Vps54Q5SPW0 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC12.65□□□□□ -0.38
Vps54Q5SPW0 Gm7445-201ENSMUST00000192115 340 ntBASIC12.65□□□□□ -0.38
Vps54Q5SPW0 Gm8625-201ENSMUST00000194185 1077 ntBASIC12.65□□□□□ -0.38
Vps54Q5SPW0 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC12.65□□□□□ -0.38
Vps54Q5SPW0 Gm7192-201ENSMUST00000210793 1137 ntBASIC12.65□□□□□ -0.38
Vps54Q5SPW0 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vps54Q5SPW0 Gm8796-201ENSMUST00000219122 936 ntBASIC12.65□□□□□ -0.38
Vps54Q5SPW0 AC142266.1-201ENSMUST00000228107 415 ntBASIC12.65□□□□□ -0.38
Vps54Q5SPW0 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Vps54Q5SPW0 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps54Q5SPW0 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Vps54Q5SPW0 Olfr1219-201ENSMUST00000099797 936 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Vps54Q5SPW0 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps54Q5SPW0 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC12.65□□□□□ -0.38
Vps54Q5SPW0 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps54Q5SPW0 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps54Q5SPW0 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps54Q5SPW0 Clgn-201ENSMUST00000002259 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Vps54Q5SPW0 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Vps54Q5SPW0 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps54Q5SPW0 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps54Q5SPW0 AC124561.1-202ENSMUST00000228652 1929 ntBASIC12.64□□□□□ -0.39
Vps54Q5SPW0 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vps54Q5SPW0 Lrrc23-202ENSMUST00000112475 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps54Q5SPW0 Gm37422-201ENSMUST00000193794 4718 ntBASIC12.64□□□□□ -0.39
Vps54Q5SPW0 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Vps54Q5SPW0 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps54Q5SPW0 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps54Q5SPW0 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Vps54Q5SPW0 Gm22594-201ENSMUST00000104251 130 ntBASIC12.64□□□□□ -0.39
Vps54Q5SPW0 Gm6500-201ENSMUST00000119412 451 ntBASIC12.64□□□□□ -0.39
Vps54Q5SPW0 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC12.64□□□□□ -0.39
Vps54Q5SPW0 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC12.64□□□□□ -0.39
Vps54Q5SPW0 Gm23081-201ENSMUST00000157845 297 ntBASIC12.64□□□□□ -0.39
Vps54Q5SPW0 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC12.64□□□□□ -0.39
Vps54Q5SPW0 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC12.64□□□□□ -0.39
Vps54Q5SPW0 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC12.64□□□□□ -0.39
Vps54Q5SPW0 4930517L18Rik-201ENSMUST00000191880 482 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vps54Q5SPW0 Gm38349-201ENSMUST00000195732 462 ntBASIC12.64□□□□□ -0.39
Vps54Q5SPW0 Gm6069-201ENSMUST00000196501 463 ntBASIC12.64□□□□□ -0.39
Vps54Q5SPW0 Gm45310-201ENSMUST00000210436 275 ntBASIC12.64□□□□□ -0.39
Vps54Q5SPW0 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC12.64□□□□□ -0.39
Vps54Q5SPW0 AC169511.1-201ENSMUST00000227639 995 ntBASIC12.64□□□□□ -0.39
Vps54Q5SPW0 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps54Q5SPW0 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Vps54Q5SPW0 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vps54Q5SPW0 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC12.64□□□□□ -0.39
Vps54Q5SPW0 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Vps54Q5SPW0 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps54Q5SPW0 Gm38034-201ENSMUST00000193915 2069 ntBASIC12.64□□□□□ -0.39
Vps54Q5SPW0 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vps54Q5SPW0 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Vps54Q5SPW0 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps54Q5SPW0 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps54Q5SPW0 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps54Q5SPW0 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps54Q5SPW0 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps54Q5SPW0 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps54Q5SPW0 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps54Q5SPW0 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps54Q5SPW0 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Vps54Q5SPW0 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps54Q5SPW0 Htr3b-201ENSMUST00000008734 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps54Q5SPW0 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps54Q5SPW0 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC12.63□□□□□ -0.39
Vps54Q5SPW0 4933439C10Rik-203ENSMUST00000132226 3184 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps54Q5SPW0 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Vps54Q5SPW0 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Vps54Q5SPW0 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps54Q5SPW0 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps54Q5SPW0 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps54Q5SPW0 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps54Q5SPW0 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps54Q5SPW0 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps54Q5SPW0 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps54Q5SPW0 Gm8152-201ENSMUST00000120842 637 ntBASIC12.63□□□□□ -0.39
Vps54Q5SPW0 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps54Q5SPW0 Rian-210ENSMUST00000182689 295 ntTSL 5 BASIC12.63□□□□□ -0.39
Vps54Q5SPW0 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Vps54Q5SPW0 Ighv1-2-201ENSMUST00000195325 378 ntBASIC12.63□□□□□ -0.39
Vps54Q5SPW0 Gm17889-201ENSMUST00000198410 598 ntBASIC12.63□□□□□ -0.39
Vps54Q5SPW0 Gm45094-201ENSMUST00000207013 617 ntBASIC12.63□□□□□ -0.39
Vps54Q5SPW0 Klf10-203ENSMUST00000227920 2144 ntBASIC12.63□□□□□ -0.39
Vps54Q5SPW0 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps54Q5SPW0 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps54Q5SPW0 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Vps54Q5SPW0 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps54Q5SPW0 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps54Q5SPW0 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Vps54Q5SPW0 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms