Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Prim1-201ENSMUST00000026461 1583 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Cyp2b13-201ENSMUST00000005669 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Cir1-201ENSMUST00000058615 2821 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Rerg-201ENSMUST00000032347 2075 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 5830473C10Rik-202ENSMUST00000200765 1691 ntTSL 5 BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 2810006K23Rik-201ENSMUST00000077376 1677 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Gm22659-201ENSMUST00000104195 130 ntBASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Inca1-204ENSMUST00000108543 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Gm13855-201ENSMUST00000145644 744 ntTSL 2 BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Mir6974-201ENSMUST00000184381 83 ntBASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Gm27283-201ENSMUST00000184853 323 ntBASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Il24-202ENSMUST00000187650 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Gm29168-201ENSMUST00000189953 687 ntBASIC9.7□□□□□ -0.86
Spg11Q3UHA3 D830044I16Rik-205ENSMUST00000206296 845 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Gm45521-201ENSMUST00000211339 676 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 4930473H19Rik-202ENSMUST00000222124 1000 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 CT025689.5-201ENSMUST00000224316 986 ntBASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Gm10080-201ENSMUST00000075585 438 ntBASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Gm43225-201ENSMUST00000201381 1439 ntBASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Gm6124-201ENSMUST00000188240 2580 ntBASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 St3gal6-207ENSMUST00000137035 4123 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 AC154862.1-201ENSMUST00000225060 1763 ntBASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Gm5092-201ENSMUST00000188185 1675 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 AC154729.1-201ENSMUST00000224481 1501 ntBASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Gm25723-201ENSMUST00000104530 126 ntBASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Gm23368-201ENSMUST00000116939 96 ntBASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Gm8577-201ENSMUST00000122420 986 ntBASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Ccl19-203ENSMUST00000140546 773 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Ly6g6e-202ENSMUST00000172494 464 ntTSL 3 BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Mir6239-201ENSMUST00000183564 105 ntBASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Gm28916-201ENSMUST00000186988 699 ntBASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Rarres2-204ENSMUST00000204267 795 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Rarres2-205ENSMUST00000204930 681 ntAPPRIS P3 TSL 2 BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Klk1b2-ps-201ENSMUST00000206099 786 ntBASIC9.7□□□□□ -0.86
Spg11Q3UHA3 AC158531.1-201ENSMUST00000224617 457 ntBASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Spg11Q3UHA3 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Spg11Q3UHA3 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Spg11Q3UHA3 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Spg11Q3UHA3 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Spg11Q3UHA3 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Spg11Q3UHA3 Cab39l-206ENSMUST00000225595 1380 ntBASIC9.69□□□□□ -0.86
Spg11Q3UHA3 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC9.69□□□□□ -0.86
Spg11Q3UHA3 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Spg11Q3UHA3 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Spg11Q3UHA3 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC9.69□□□□□ -0.86
Spg11Q3UHA3 Gm37644-201ENSMUST00000192190 2270 ntBASIC9.69□□□□□ -0.86
Spg11Q3UHA3 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Spg11Q3UHA3 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Spg11Q3UHA3 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Spg11Q3UHA3 Trbv14-201ENSMUST00000103272 368 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Spg11Q3UHA3 Hnf1aos1-202ENSMUST00000129609 516 ntTSL 2 BASIC9.69□□□□□ -0.86
Spg11Q3UHA3 Gm11959-201ENSMUST00000148655 723 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Spg11Q3UHA3 Gm17120-201ENSMUST00000164734 743 ntTSL 3 BASIC9.69□□□□□ -0.86
Spg11Q3UHA3 Zfp572-201ENSMUST00000183674 1098 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Spg11Q3UHA3 Gm23927-202ENSMUST00000199928 216 ntBASIC9.69□□□□□ -0.86
Spg11Q3UHA3 Olfr960-203ENSMUST00000216584 1148 ntAPPRIS ALT2 TSL 3 BASIC9.69□□□□□ -0.86
Spg11Q3UHA3 Gm40604-201ENSMUST00000217765 655 ntTSL 5 BASIC9.69□□□□□ -0.86
Spg11Q3UHA3 Gm8689-201ENSMUST00000218709 712 ntBASIC9.69□□□□□ -0.86
Spg11Q3UHA3 AC107369.2-201ENSMUST00000226154 916 ntBASIC9.69□□□□□ -0.86
Spg11Q3UHA3 4930570G19Rik-201ENSMUST00000139363 3112 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Spg11Q3UHA3 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms