Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Spata31d1a-201ENSMUST00000066510 4261 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Kng1-202ENSMUST00000039492 1985 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Gm26614-201ENSMUST00000180386 3909 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Proser3-201ENSMUST00000062708 1905 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 CT033774.1-201ENSMUST00000223084 2394 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Zfp948-201ENSMUST00000088787 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Toe1-201ENSMUST00000030451 2090 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Mkrn2os-202ENSMUST00000112957 964 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Gm37390-201ENSMUST00000192452 872 ntBASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 AC134793.1-202ENSMUST00000227444 803 ntBASIC11.17□□□□□ -0.62
Trim43aQ3TL54 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Gm10263-201ENSMUST00000085163 300 ntBASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Sncaip-203ENSMUST00000163742 3272 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Tyw3-204ENSMUST00000170461 4270 ntTSL 5 BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Mtfr1-204ENSMUST00000130645 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Tex21-202ENSMUST00000218426 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Fam171a1-202ENSMUST00000072955 3364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Gpm6b-201ENSMUST00000060210 2858 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Atg13-202ENSMUST00000076803 3551 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Zfp958-202ENSMUST00000202692 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Ppm1f-201ENSMUST00000027373 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Zfp112-201ENSMUST00000005413 3044 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim43aQ3TL54 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Plekhg5-201ENSMUST00000084115 4113 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Rpl18-207ENSMUST00000210640 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim43aQ3TL54 1810034E14Rik-201ENSMUST00000181403 1805 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Ptgr1-201ENSMUST00000030069 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Gm43143-201ENSMUST00000196083 2023 ntBASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Dctn1-202ENSMUST00000113907 4205 ntTSL 5 BASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Nipal3-202ENSMUST00000105856 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Zfp264-202ENSMUST00000208781 2801 ntTSL 5 BASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Gm25076-201ENSMUST00000104098 132 ntBASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Gm1848-201ENSMUST00000120711 789 ntBASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Gm27438-201ENSMUST00000183480 110 ntBASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Gm43163-201ENSMUST00000196571 442 ntBASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Gm43097-201ENSMUST00000196867 151 ntBASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Gm43811-201ENSMUST00000202862 695 ntBASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Gm5130-201ENSMUST00000210233 959 ntBASIC11.16□□□□□ -0.62
Trim43aQ3TL54 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Gm7594-201ENSMUST00000218595 871 ntBASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Vps33a-201ENSMUST00000031388 4235 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Npnt-205ENSMUST00000117456 3383 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Pex5l-204ENSMUST00000108224 2721 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Eftud2-212ENSMUST00000173679 2889 ntTSL 5 BASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Kat7-204ENSMUST00000107733 3470 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Babam2-201ENSMUST00000063813 1410 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Gm38192-201ENSMUST00000194364 1847 ntBASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Scnn1a-206ENSMUST00000176655 3354 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Gm19557-201ENSMUST00000182109 2765 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Gm26797-202ENSMUST00000213132 2562 ntTSL 5 BASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Fubp1-201ENSMUST00000106121 4525 ntAPPRIS P2 TSL 2 BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms