Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Kif2a-206ENSMUST00000159772 2570 ntTSL 5 BASIC9□□□□□ -0.97
Smn1P97801 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Smn1P97801 Champ1-201ENSMUST00000051870 4013 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Smn1P97801 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC9□□□□□ -0.97
Smn1P97801 Sgo2b-201ENSMUST00000179944 3739 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Smn1P97801 Ispd-206ENSMUST00000223068 2808 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Smn1P97801 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smn1P97801 Gsdmc3-203ENSMUST00000190682 2140 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smn1P97801 Gm8016-201ENSMUST00000221830 1575 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Smn1P97801 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC8.99□□□□□ -0.97
Smn1P97801 Cd200r2-201ENSMUST00000102805 1750 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smn1P97801 Dhx35-202ENSMUST00000109478 3284 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Smn1P97801 Gpr75-201ENSMUST00000109430 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smn1P97801 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Smn1P97801 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Smn1P97801 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Smn1P97801 Fkbp15-201ENSMUST00000084527 4264 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smn1P97801 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smn1P97801 Gm42521-201ENSMUST00000199190 2040 ntBASIC8.99□□□□□ -0.97
Smn1P97801 Trim9-211ENSMUST00000223160 3574 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Smn1P97801 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smn1P97801 Trpm1-201ENSMUST00000085222 5711 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smn1P97801 Upb1-201ENSMUST00000039925 3042 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smn1P97801 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Smn1P97801 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Smn1P97801 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC8.99□□□□□ -0.97
Smn1P97801 Gm11952-201ENSMUST00000121172 821 ntBASIC8.99□□□□□ -0.97
Smn1P97801 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC8.99□□□□□ -0.97
Smn1P97801 Gm14363-201ENSMUST00000122304 409 ntBASIC8.99□□□□□ -0.97
Smn1P97801 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC8.99□□□□□ -0.97
Smn1P97801 Gm10051-201ENSMUST00000145209 414 ntBASIC8.99□□□□□ -0.97
Smn1P97801 Gm22885-201ENSMUST00000157410 107 ntBASIC8.99□□□□□ -0.97
Smn1P97801 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC8.99□□□□□ -0.97
Smn1P97801 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC8.99□□□□□ -0.97
Smn1P97801 Gm19927-201ENSMUST00000185792 781 ntBASIC8.99□□□□□ -0.97
Smn1P97801 Mrgprx3-ps-201ENSMUST00000187741 918 ntBASIC8.99□□□□□ -0.97
Smn1P97801 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC8.99□□□□□ -0.97
Smn1P97801 Gm8918-201ENSMUST00000190587 1087 ntBASIC8.99□□□□□ -0.97
Smn1P97801 Gm43163-201ENSMUST00000196571 442 ntBASIC8.99□□□□□ -0.97
Smn1P97801 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC8.99□□□□□ -0.97
Smn1P97801 Gm44420-201ENSMUST00000203669 490 ntBASIC8.99□□□□□ -0.97
Smn1P97801 CT485606.1-201ENSMUST00000213187 878 ntBASIC8.99□□□□□ -0.97
Smn1P97801 AC154435.1-201ENSMUST00000223938 959 ntBASIC8.99□□□□□ -0.97
Smn1P97801 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smn1P97801 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smn1P97801 Gm10263-201ENSMUST00000085163 300 ntBASIC8.99□□□□□ -0.97
Smn1P97801 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Smn1P97801 Copa-206ENSMUST00000135192 4622 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smn1P97801 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Smn1P97801 Mfsd11-201ENSMUST00000021173 3298 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smn1P97801 Zfp24-201ENSMUST00000066497 5732 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smn1P97801 Pdpr-201ENSMUST00000039333 4938 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smn1P97801 Anks1b-216ENSMUST00000182430 3305 ntTSL 5 BASIC8.99□□□□□ -0.97
Smn1P97801 Lrrc28-202ENSMUST00000053950 2923 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smn1P97801 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Smn1P97801 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC8.99□□□□□ -0.97
Smn1P97801 Miga2-202ENSMUST00000100214 3586 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smn1P97801 Lama3-201ENSMUST00000092070 10548 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Smn1P97801 Efna5-201ENSMUST00000076840 4032 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smn1P97801 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Smn1P97801 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Smn1P97801 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Smn1P97801 Vash2-202ENSMUST00000166139 3897 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smn1P97801 Supt20-ps-201ENSMUST00000117999 1560 ntBASIC8.99□□□□□ -0.97
Smn1P97801 Odf2-205ENSMUST00000113757 3082 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Smn1P97801 Slc35f6-201ENSMUST00000062962 3088 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smn1P97801 Nrap-205ENSMUST00000167239 4752 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Smn1P97801 Acbd5-212ENSMUST00000227663 4566 ntAPPRIS ALT2 BASIC8.98□□□□□ -0.97
Smn1P97801 Rxfp2-202ENSMUST00000110496 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smn1P97801 Adgrl3-204ENSMUST00000117407 5705 ntTSL 5 BASIC8.98□□□□□ -0.97
Smn1P97801 Mak-203ENSMUST00000165087 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smn1P97801 Ptk2b-201ENSMUST00000022622 4034 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Smn1P97801 Dusp16-201ENSMUST00000100857 5104 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smn1P97801 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smn1P97801 Adamts13-202ENSMUST00000102891 4506 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smn1P97801 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC8.98□□□□□ -0.97
Smn1P97801 Thsd7b-201ENSMUST00000040311 3895 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Smn1P97801 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Smn1P97801 Pmel-201ENSMUST00000054125 2130 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smn1P97801 Zfp958-202ENSMUST00000202692 2364 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smn1P97801 Gm37048-201ENSMUST00000194827 5578 ntBASIC8.98□□□□□ -0.97
Smn1P97801 Ncapg2-201ENSMUST00000084828 4684 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Smn1P97801 Hdac7-208ENSMUST00000121514 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smn1P97801 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC8.98□□□□□ -0.97
Smn1P97801 Gm10390-202ENSMUST00000181905 4269 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Smn1P97801 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Smn1P97801 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Smn1P97801 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smn1P97801 Klrc2-202ENSMUST00000112057 1149 ntAPPRIS P4 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smn1P97801 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC8.98□□□□□ -0.97
Smn1P97801 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC8.98□□□□□ -0.97
Smn1P97801 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smn1P97801 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC8.98□□□□□ -0.97
Smn1P97801 Gm19015-201ENSMUST00000184002 1189 ntBASIC8.98□□□□□ -0.97
Smn1P97801 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Smn1P97801 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smn1P97801 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC8.98□□□□□ -0.97
Smn1P97801 Gm6546-201ENSMUST00000192096 766 ntBASIC8.98□□□□□ -0.97
Smn1P97801 Gm37390-201ENSMUST00000192452 872 ntBASIC8.98□□□□□ -0.97
Smn1P97801 Gm9555-201ENSMUST00000200908 583 ntBASIC8.98□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms