Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
ClgnP52194 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
ClgnP52194 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
ClgnP52194 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
ClgnP52194 Gm9884-201ENSMUST00000194343 1222 ntBASIC10.83□□□□□ -0.68
ClgnP52194 Gm38321-201ENSMUST00000195053 235 ntBASIC10.83□□□□□ -0.68
ClgnP52194 Gm5865-201ENSMUST00000198713 637 ntBASIC10.83□□□□□ -0.68
ClgnP52194 Gm42859-201ENSMUST00000199572 193 ntBASIC10.83□□□□□ -0.68
ClgnP52194 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC10.83□□□□□ -0.68
ClgnP52194 Gm42657-201ENSMUST00000201746 211 ntBASIC10.83□□□□□ -0.68
ClgnP52194 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
ClgnP52194 CT009536.2-201ENSMUST00000225370 665 ntBASIC10.83□□□□□ -0.68
ClgnP52194 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
ClgnP52194 AC099645.1-201ENSMUST00000226476 1105 ntBASIC10.83□□□□□ -0.68
ClgnP52194 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
ClgnP52194 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
ClgnP52194 Adam22-202ENSMUST00000050166 8969 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
ClgnP52194 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
ClgnP52194 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
ClgnP52194 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
ClgnP52194 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
ClgnP52194 Gm45336-201ENSMUST00000210010 3230 ntTSL 5 BASIC10.83□□□□□ -0.68
ClgnP52194 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
ClgnP52194 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
ClgnP52194 Hsd3b5-201ENSMUST00000044094 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
ClgnP52194 Pex2-203ENSMUST00000164828 2051 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
ClgnP52194 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
ClgnP52194 Cass4-201ENSMUST00000099061 3731 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
ClgnP52194 Fam210a-201ENSMUST00000042852 9651 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
ClgnP52194 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
ClgnP52194 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
ClgnP52194 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
ClgnP52194 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
ClgnP52194 Tec-201ENSMUST00000071944 2659 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
ClgnP52194 Smarcc2-203ENSMUST00000105235 4032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
ClgnP52194 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
ClgnP52194 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
ClgnP52194 Gm21969-201ENSMUST00000178644 4402 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
ClgnP52194 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
ClgnP52194 Zmiz2-204ENSMUST00000109786 4319 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
ClgnP52194 Gm42669-202ENSMUST00000160160 3080 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
ClgnP52194 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC10.82□□□□□ -0.68
ClgnP52194 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
ClgnP52194 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
ClgnP52194 D030047H15Rik-201ENSMUST00000148318 2536 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
ClgnP52194 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
ClgnP52194 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
ClgnP52194 Spata31d1a-201ENSMUST00000066510 4261 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
ClgnP52194 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
ClgnP52194 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
ClgnP52194 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
ClgnP52194 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC10.82□□□□□ -0.68
ClgnP52194 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
ClgnP52194 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC10.82□□□□□ -0.68
ClgnP52194 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC10.82□□□□□ -0.68
ClgnP52194 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
ClgnP52194 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
ClgnP52194 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC10.82□□□□□ -0.68
ClgnP52194 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
ClgnP52194 Gm8531-201ENSMUST00000188319 893 ntBASIC10.82□□□□□ -0.68
ClgnP52194 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
ClgnP52194 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC10.82□□□□□ -0.68
ClgnP52194 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC10.82□□□□□ -0.68
ClgnP52194 Gm4811-201ENSMUST00000220879 1220 ntBASIC10.82□□□□□ -0.68
ClgnP52194 AC115304.2-201ENSMUST00000226399 332 ntBASIC10.82□□□□□ -0.68
ClgnP52194 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
ClgnP52194 Tmem106a-201ENSMUST00000039581 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
ClgnP52194 Tnk2-206ENSMUST00000115125 4313 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
ClgnP52194 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
ClgnP52194 Tmco4-201ENSMUST00000043042 2922 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
ClgnP52194 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
ClgnP52194 Gm38005-201ENSMUST00000194845 2745 ntBASIC10.82□□□□□ -0.68
ClgnP52194 Unc13d-209ENSMUST00000174822 3337 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
ClgnP52194 Itgal-203ENSMUST00000118405 3909 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
ClgnP52194 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
ClgnP52194 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
ClgnP52194 Sept6-201ENSMUST00000053456 4673 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
ClgnP52194 1810041L15Rik-201ENSMUST00000080751 5917 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
ClgnP52194 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
ClgnP52194 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
ClgnP52194 Oprl1-205ENSMUST00000108768 2914 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
ClgnP52194 Ralgps2-202ENSMUST00000063199 2947 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
ClgnP52194 Anpep-201ENSMUST00000049004 3422 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
ClgnP52194 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC10.81□□□□□ -0.68
ClgnP52194 Gm38312-201ENSMUST00000195426 1746 ntBASIC10.81□□□□□ -0.68
ClgnP52194 Dsg1a-201ENSMUST00000077146 5686 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
ClgnP52194 Rgs8-202ENSMUST00000111810 5614 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
ClgnP52194 Tubb5-201ENSMUST00000001566 2649 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
ClgnP52194 Gm6768-201ENSMUST00000022467 1878 ntBASIC10.81□□□□□ -0.68
ClgnP52194 Slc23a1-201ENSMUST00000025212 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
ClgnP52194 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
ClgnP52194 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
ClgnP52194 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC10.81□□□□□ -0.68
ClgnP52194 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
ClgnP52194 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
ClgnP52194 Mir1901-201ENSMUST00000122616 78 ntBASIC10.81□□□□□ -0.68
ClgnP52194 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
ClgnP52194 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
ClgnP52194 Gm25226-201ENSMUST00000158198 123 ntBASIC10.81□□□□□ -0.68
ClgnP52194 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms