Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Gm28624-201ENSMUST00000186430 2131 ntBASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Clgn-201ENSMUST00000002259 3902 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Snord23-201ENSMUST00000116828 109 ntBASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Gm12389-201ENSMUST00000117696 418 ntBASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Gm14497-201ENSMUST00000119537 580 ntBASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Gm19013-201ENSMUST00000183895 1222 ntBASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Gm19014-201ENSMUST00000184828 1189 ntBASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Gm7525-201ENSMUST00000219425 454 ntBASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 AC099645.1-201ENSMUST00000226476 1105 ntBASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Pms2-209ENSMUST00000148011 5482 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Smarcc2-202ENSMUST00000099131 4562 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Stx8-201ENSMUST00000021285 4394 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Zfp532-201ENSMUST00000049016 5503 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Nkx2-2os-201ENSMUST00000136998 4345 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61a2Q9JLR1 Wdr37-212ENSMUST00000176922 3780 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Gm44106-201ENSMUST00000203153 1599 ntBASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Gm38312-201ENSMUST00000195426 1746 ntBASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Svil-203ENSMUST00000126977 7907 ntAPPRIS P3 TSL 5 BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Syt2-201ENSMUST00000121990 6879 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Frmd4a-219ENSMUST00000177457 6538 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Kat6b-207ENSMUST00000182855 6791 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Gm23061-201ENSMUST00000102348 116 ntBASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Gm12795-201ENSMUST00000117594 539 ntBASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Nod2-203ENSMUST00000118370 4653 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Gm40414-201ENSMUST00000197608 481 ntBASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Gm7082-201ENSMUST00000209880 969 ntBASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 CT030166.5-201ENSMUST00000222249 420 ntBASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 AC154436.1-201ENSMUST00000227272 782 ntBASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms