Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh15Q99PJ1 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh15Q99PJ1 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh15Q99PJ1 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh15Q99PJ1 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh15Q99PJ1 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh15Q99PJ1 Sf3a3-201ENSMUST00000030734 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh15Q99PJ1 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh15Q99PJ1 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh15Q99PJ1 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Pcdh15Q99PJ1 2810455O05Rik-201ENSMUST00000138442 1691 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh15Q99PJ1 Gm10339-202ENSMUST00000181509 1691 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh15Q99PJ1 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh15Q99PJ1 Rasgrp1-203ENSMUST00000172901 1903 ntTSL 5 BASIC11.69□□□□□ -0.54
Pcdh15Q99PJ1 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh15Q99PJ1 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Pcdh15Q99PJ1 Mkrn2os-202ENSMUST00000112957 964 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Pcdh15Q99PJ1 Gm11789-205ENSMUST00000148579 649 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh15Q99PJ1 Gm15641-201ENSMUST00000161407 670 ntTSL 3 BASIC11.69□□□□□ -0.54
Pcdh15Q99PJ1 Gm25687-201ENSMUST00000175442 241 ntBASIC11.69□□□□□ -0.54
Pcdh15Q99PJ1 AC164315.1-202ENSMUST00000226723 657 ntBASIC11.69□□□□□ -0.54
Pcdh15Q99PJ1 AC161763.1-201ENSMUST00000227063 168 ntBASIC11.69□□□□□ -0.54
Pcdh15Q99PJ1 Lyg1-201ENSMUST00000027254 800 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Pcdh15Q99PJ1 1700063H04Rik-201ENSMUST00000043553 817 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh15Q99PJ1 Klk4-201ENSMUST00000007161 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh15Q99PJ1 Rpl21-ps12-201ENSMUST00000080061 480 ntBASIC11.69□□□□□ -0.54
Pcdh15Q99PJ1 Phactr1-202ENSMUST00000110161 1950 ntTSL 5 BASIC11.69□□□□□ -0.54
Pcdh15Q99PJ1 BB014433-203ENSMUST00000179941 1543 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Pcdh15Q99PJ1 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.69□□□□□ -0.54
Pcdh15Q99PJ1 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh15Q99PJ1 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh15Q99PJ1 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh15Q99PJ1 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.69□□□□□ -0.54
Pcdh15Q99PJ1 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.69□□□□□ -0.54
Pcdh15Q99PJ1 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh15Q99PJ1 Gtf2h3-201ENSMUST00000031333 2672 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh15Q99PJ1 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Pcdh15Q99PJ1 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Pcdh15Q99PJ1 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC11.69□□□□□ -0.54
Pcdh15Q99PJ1 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh15Q99PJ1 Prdx1-204ENSMUST00000135573 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh15Q99PJ1 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh15Q99PJ1 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Mfap5-202ENSMUST00000118626 748 ntAPPRIS ALT2 TSL 3 BASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 4930401O10Rik-201ENSMUST00000128489 787 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Gm4473-201ENSMUST00000145987 657 ntTSL 2 BASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Gm12862-201ENSMUST00000150754 472 ntTSL 5 BASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 2900076A07Rik-201ENSMUST00000180385 914 ntTSL 3 BASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 1810007D17Rik-201ENSMUST00000187629 742 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Il19-204ENSMUST00000187916 720 ntTSL 2 BASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Igkv3-11-201ENSMUST00000197500 385 ntBASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Gm18873-201ENSMUST00000219517 1045 ntBASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Gm15283-202ENSMUST00000221427 818 ntTSL 5 BASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 AC159244.2-201ENSMUST00000222051 220 ntTSL 3 BASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Lgals9-201ENSMUST00000073001 1074 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Cib3-201ENSMUST00000098630 585 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Birc3-202ENSMUST00000115672 2909 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Gm37242-201ENSMUST00000191873 2085 ntBASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Gm37909-201ENSMUST00000193157 2159 ntBASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Ddias-201ENSMUST00000032877 3387 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Pdcd1lg2-201ENSMUST00000112576 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 AC129336.2-201ENSMUST00000218053 3086 ntBASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Gm15499-201ENSMUST00000141390 422 ntTSL 5 BASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Gm25735-201ENSMUST00000175164 215 ntBASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Gm3534-201ENSMUST00000182522 1001 ntBASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Gm8992-201ENSMUST00000204463 502 ntBASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Gm36431-202ENSMUST00000209956 687 ntTSL 5 BASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Gm45795-201ENSMUST00000211847 400 ntBASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 AC126939.2-201ENSMUST00000225989 307 ntBASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 AC140244.1-201ENSMUST00000228454 229 ntBASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Hpf1-201ENSMUST00000037190 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Sell-202ENSMUST00000097491 1215 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh15Q99PJ1 Tbxas1-206ENSMUST00000162521 1427 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh15Q99PJ1 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Pcdh15Q99PJ1 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms