Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Bhlhe40-201ENSMUST00000032194 3113 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm3P62311 Acox2-204ENSMUST00000164598 2907 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm3P62311 Gm38005-201ENSMUST00000194845 2745 ntBASIC9.5□□□□□ -0.89
Lsm3P62311 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm3P62311 Ryr1-201ENSMUST00000032813 15352 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Lsm3P62311 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm3P62311 Garnl3-207ENSMUST00000137381 3551 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm3P62311 Ctns-201ENSMUST00000006103 2570 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm3P62311 Nav2-202ENSMUST00000064395 11317 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Lsm3P62311 Stk11ip-201ENSMUST00000027414 4458 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm3P62311 Sfi1-203ENSMUST00000101655 3888 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Lsm3P62311 Usp28-203ENSMUST00000213874 4109 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm3P62311 Naa25-201ENSMUST00000042163 5447 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm3P62311 Trim9-201ENSMUST00000110520 4156 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm3P62311 Nedd4l-201ENSMUST00000080418 3326 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm3P62311 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm3P62311 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm3P62311 Prpf31-206ENSMUST00000179769 3125 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm3P62311 Add2-201ENSMUST00000032069 3119 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm3P62311 Ndst3-206ENSMUST00000154668 5570 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Lsm3P62311 Slc7a9-202ENSMUST00000118383 1869 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Lsm3P62311 Slc17a2-202ENSMUST00000099697 1893 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Lsm3P62311 Grb2-204ENSMUST00000106499 2333 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm3P62311 Mak-203ENSMUST00000165087 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm3P62311 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm3P62311 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC9.49□□□□□ -0.89
Lsm3P62311 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC9.49□□□□□ -0.89
Lsm3P62311 Gm6397-201ENSMUST00000161973 1069 ntBASIC9.49□□□□□ -0.89
Lsm3P62311 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC9.49□□□□□ -0.89
Lsm3P62311 Gm7696-201ENSMUST00000174727 907 ntBASIC9.49□□□□□ -0.89
Lsm3P62311 Gm6407-201ENSMUST00000176468 549 ntBASIC9.49□□□□□ -0.89
Lsm3P62311 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Lsm3P62311 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC9.49□□□□□ -0.89
Lsm3P62311 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC9.49□□□□□ -0.89
Lsm3P62311 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC9.49□□□□□ -0.89
Lsm3P62311 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC9.49□□□□□ -0.89
Lsm3P62311 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC9.49□□□□□ -0.89
Lsm3P62311 Gm18615-201ENSMUST00000222919 1031 ntBASIC9.49□□□□□ -0.89
Lsm3P62311 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm3P62311 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm3P62311 Olfr1199-204ENSMUST00000213138 2657 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Lsm3P62311 Fbxo34-204ENSMUST00000165714 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm3P62311 Rrh-202ENSMUST00000171313 1759 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm3P62311 Alms1-201ENSMUST00000072018 9986 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm3P62311 Add2-210ENSMUST00000205034 3266 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm3P62311 Zfp541-201ENSMUST00000108509 4561 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm3P62311 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm3P62311 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm3P62311 Gm1559-201ENSMUST00000219596 3117 ntTSL 3 BASIC9.49□□□□□ -0.89
Lsm3P62311 A3galt2-201ENSMUST00000030585 3390 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm3P62311 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm3P62311 Nod2-203ENSMUST00000118370 4653 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm3P62311 Trpm1-202ENSMUST00000177102 2928 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm3P62311 Gm12709-201ENSMUST00000149348 1912 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm3P62311 Ints10-204ENSMUST00000110242 4250 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm3P62311 Fkbp6-201ENSMUST00000044972 1447 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm3P62311 Pcx-202ENSMUST00000113825 4044 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm3P62311 Six6-201ENSMUST00000021519 4009 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm3P62311 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm3P62311 Pde2a-212ENSMUST00000211368 3885 ntAPPRIS P3 TSL 5 BASIC9.48□□□□□ -0.89
Lsm3P62311 Gm29101-201ENSMUST00000188329 1471 ntBASIC9.48□□□□□ -0.89
Lsm3P62311 Cep83os-201ENSMUST00000181906 6566 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm3P62311 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Lsm3P62311 Catsperd-201ENSMUST00000112979 2565 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm3P62311 St5-202ENSMUST00000079282 4255 ntAPPRIS P4 TSL 5 BASIC9.48□□□□□ -0.89
Lsm3P62311 Rapgef6-203ENSMUST00000102743 8189 ntAPPRIS P3 TSL 5 BASIC9.48□□□□□ -0.89
Lsm3P62311 Gm43660-201ENSMUST00000200956 6548 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm3P62311 Cpne5-201ENSMUST00000024805 4344 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm3P62311 Gm15663-201ENSMUST00000145794 3200 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm3P62311 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm3P62311 Cyp1a1-202ENSMUST00000216433 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm3P62311 Aoc3-202ENSMUST00000103105 4397 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm3P62311 Gm12986-201ENSMUST00000119037 967 ntBASIC9.48□□□□□ -0.89
Lsm3P62311 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
Lsm3P62311 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC9.48□□□□□ -0.89
Lsm3P62311 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm3P62311 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC9.48□□□□□ -0.89
Lsm3P62311 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC9.48□□□□□ -0.89
Lsm3P62311 Gm16505-201ENSMUST00000179981 232 ntBASIC9.48□□□□□ -0.89
Lsm3P62311 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC9.48□□□□□ -0.89
Lsm3P62311 Mir7051-201ENSMUST00000184167 73 ntBASIC9.48□□□□□ -0.89
Lsm3P62311 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC9.48□□□□□ -0.89
Lsm3P62311 AC124581.2-201ENSMUST00000225459 282 ntBASIC9.48□□□□□ -0.89
Lsm3P62311 AC154276.3-201ENSMUST00000227643 998 ntBASIC9.48□□□□□ -0.89
Lsm3P62311 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm3P62311 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm3P62311 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm3P62311 Olfr169-201ENSMUST00000090062 942 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Lsm3P62311 Dio2-201ENSMUST00000082432 5815 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm3P62311 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC9.48□□□□□ -0.89
Lsm3P62311 Gm8016-201ENSMUST00000221830 1575 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm3P62311 Nuggc-202ENSMUST00000150897 2745 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Lsm3P62311 Snrpd3-201ENSMUST00000020397 3036 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm3P62311 Grm3-201ENSMUST00000004076 3049 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm3P62311 Gm28988-201ENSMUST00000191363 1897 ntTSL 5 BASIC9.48□□□□□ -0.89
Lsm3P62311 Kcna4-201ENSMUST00000037012 4792 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm3P62311 Gm37798-201ENSMUST00000193026 2169 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm3P62311 Myo15-201ENSMUST00000071880 11769 ntAPPRIS P4 TSL 5 BASIC9.48□□□□□ -0.89
Lsm3P62311 Gm4810-201ENSMUST00000177721 1607 ntBASIC9.48□□□□□ -0.89
Lsm3P62311 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC9.48□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms