Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nubp2Q9R061 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nubp2Q9R061 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nubp2Q9R061 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nubp2Q9R061 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nubp2Q9R061 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nubp2Q9R061 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Nubp2Q9R061 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nubp2Q9R061 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.57■□□□□ 0.4
Nubp2Q9R061 Gm9870-201ENSMUST00000063874 645 ntBASIC17.57■□□□□ 0.4
Nubp2Q9R061 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Nubp2Q9R061 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.56■□□□□ 0.4
Nubp2Q9R061 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nubp2Q9R061 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nubp2Q9R061 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nubp2Q9R061 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nubp2Q9R061 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nubp2Q9R061 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nubp2Q9R061 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nubp2Q9R061 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nubp2Q9R061 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nubp2Q9R061 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nubp2Q9R061 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nubp2Q9R061 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nubp2Q9R061 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nubp2Q9R061 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Nubp2Q9R061 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Nubp2Q9R061 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nubp2Q9R061 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nubp2Q9R061 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nubp2Q9R061 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.54■□□□□ 0.4
Nubp2Q9R061 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.54■□□□□ 0.4
Nubp2Q9R061 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Nubp2Q9R061 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nubp2Q9R061 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nubp2Q9R061 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nubp2Q9R061 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.54■□□□□ 0.4
Nubp2Q9R061 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.54■□□□□ 0.4
Nubp2Q9R061 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nubp2Q9R061 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Nubp2Q9R061 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nubp2Q9R061 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.53■□□□□ 0.4
Nubp2Q9R061 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nubp2Q9R061 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nubp2Q9R061 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nubp2Q9R061 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nubp2Q9R061 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nubp2Q9R061 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.52■□□□□ 0.4
Nubp2Q9R061 Gm12821-201ENSMUST00000120022 600 ntBASIC17.52■□□□□ 0.4
Nubp2Q9R061 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nubp2Q9R061 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.52■□□□□ 0.4
Nubp2Q9R061 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.52■□□□□ 0.4
Nubp2Q9R061 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.52■□□□□ 0.4
Nubp2Q9R061 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.52■□□□□ 0.4
Nubp2Q9R061 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nubp2Q9R061 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.52■□□□□ 0.39
Nubp2Q9R061 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.52■□□□□ 0.39
Nubp2Q9R061 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.52■□□□□ 0.39
Nubp2Q9R061 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nubp2Q9R061 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nubp2Q9R061 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Nubp2Q9R061 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nubp2Q9R061 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nubp2Q9R061 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.51■□□□□ 0.39
Nubp2Q9R061 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Nubp2Q9R061 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nubp2Q9R061 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nubp2Q9R061 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nubp2Q9R061 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nubp2Q9R061 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nubp2Q9R061 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nubp2Q9R061 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nubp2Q9R061 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nubp2Q9R061 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.51■□□□□ 0.39
Nubp2Q9R061 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nubp2Q9R061 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nubp2Q9R061 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nubp2Q9R061 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nubp2Q9R061 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nubp2Q9R061 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nubp2Q9R061 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nubp2Q9R061 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Nubp2Q9R061 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Nubp2Q9R061 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nubp2Q9R061 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nubp2Q9R061 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nubp2Q9R061 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nubp2Q9R061 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.49■□□□□ 0.39
Nubp2Q9R061 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.49■□□□□ 0.39
Nubp2Q9R061 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nubp2Q9R061 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nubp2Q9R061 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nubp2Q9R061 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nubp2Q9R061 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Nubp2Q9R061 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nubp2Q9R061 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nubp2Q9R061 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nubp2Q9R061 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nubp2Q9R061 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Nubp2Q9R061 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms