Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ndc80Q9D0F1 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ndc80Q9D0F1 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ndc80Q9D0F1 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ndc80Q9D0F1 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ndc80Q9D0F1 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ndc80Q9D0F1 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Ndc80Q9D0F1 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ndc80Q9D0F1 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.19■□□□□ 0.82
Ndc80Q9D0F1 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.19■□□□□ 0.82
Ndc80Q9D0F1 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Ndc80Q9D0F1 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Ndc80Q9D0F1 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ndc80Q9D0F1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ndc80Q9D0F1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ndc80Q9D0F1 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ndc80Q9D0F1 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.18■□□□□ 0.82
Ndc80Q9D0F1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ndc80Q9D0F1 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ndc80Q9D0F1 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ndc80Q9D0F1 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ndc80Q9D0F1 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ndc80Q9D0F1 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.17■□□□□ 0.82
Ndc80Q9D0F1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ndc80Q9D0F1 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ndc80Q9D0F1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ndc80Q9D0F1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ndc80Q9D0F1 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ndc80Q9D0F1 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ndc80Q9D0F1 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ndc80Q9D0F1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ndc80Q9D0F1 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Ndc80Q9D0F1 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ndc80Q9D0F1 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Ndc80Q9D0F1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Ndc80Q9D0F1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ndc80Q9D0F1 Gm43530-201ENSMUST00000195920 274 ntBASIC20.16■□□□□ 0.82
Ndc80Q9D0F1 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ndc80Q9D0F1 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.16■□□□□ 0.82
Ndc80Q9D0F1 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.16■□□□□ 0.82
Ndc80Q9D0F1 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ndc80Q9D0F1 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ndc80Q9D0F1 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ndc80Q9D0F1 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ndc80Q9D0F1 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ndc80Q9D0F1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ndc80Q9D0F1 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.15■□□□□ 0.82
Ndc80Q9D0F1 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ndc80Q9D0F1 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ndc80Q9D0F1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ndc80Q9D0F1 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ndc80Q9D0F1 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ndc80Q9D0F1 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ndc80Q9D0F1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ndc80Q9D0F1 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ndc80Q9D0F1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ndc80Q9D0F1 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ndc80Q9D0F1 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ndc80Q9D0F1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ndc80Q9D0F1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ndc80Q9D0F1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ndc80Q9D0F1 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ndc80Q9D0F1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ndc80Q9D0F1 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ndc80Q9D0F1 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ndc80Q9D0F1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ndc80Q9D0F1 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.13■□□□□ 0.81
Ndc80Q9D0F1 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ndc80Q9D0F1 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.13■□□□□ 0.81
Ndc80Q9D0F1 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ndc80Q9D0F1 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ndc80Q9D0F1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ndc80Q9D0F1 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ndc80Q9D0F1 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ndc80Q9D0F1 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ndc80Q9D0F1 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.12■□□□□ 0.81
Ndc80Q9D0F1 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ndc80Q9D0F1 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ndc80Q9D0F1 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ndc80Q9D0F1 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ndc80Q9D0F1 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ndc80Q9D0F1 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ndc80Q9D0F1 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ndc80Q9D0F1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ndc80Q9D0F1 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ndc80Q9D0F1 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ndc80Q9D0F1 Gm12922-201ENSMUST00000120626 809 ntBASIC20.11■□□□□ 0.81
Ndc80Q9D0F1 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.11■□□□□ 0.81
Ndc80Q9D0F1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ndc80Q9D0F1 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ndc80Q9D0F1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Ndc80Q9D0F1 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Ndc80Q9D0F1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Ndc80Q9D0F1 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ndc80Q9D0F1 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ndc80Q9D0F1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ndc80Q9D0F1 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ndc80Q9D0F1 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ndc80Q9D0F1 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ndc80Q9D0F1 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms