Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdh15Q99PJ1 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
Pcdh15Q99PJ1 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC23.18■■□□□ 1.3
Pcdh15Q99PJ1 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC23.18■■□□□ 1.3
Pcdh15Q99PJ1 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdh15Q99PJ1 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdh15Q99PJ1 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdh15Q99PJ1 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
Pcdh15Q99PJ1 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdh15Q99PJ1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdh15Q99PJ1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdh15Q99PJ1 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdh15Q99PJ1 Gm20049-201ENSMUST00000219950 730 ntBASIC23.17■■□□□ 1.3
Pcdh15Q99PJ1 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdh15Q99PJ1 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdh15Q99PJ1 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC23.16■■□□□ 1.3
Pcdh15Q99PJ1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdh15Q99PJ1 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Pcdh15Q99PJ1 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdh15Q99PJ1 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdh15Q99PJ1 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdh15Q99PJ1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdh15Q99PJ1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdh15Q99PJ1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC23.16■■□□□ 1.3
Pcdh15Q99PJ1 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdh15Q99PJ1 Gm6211-202ENSMUST00000167849 925 ntBASIC23.16■■□□□ 1.3
Pcdh15Q99PJ1 Mir6236-201ENSMUST00000184437 123 ntBASIC23.16■■□□□ 1.3
Pcdh15Q99PJ1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdh15Q99PJ1 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdh15Q99PJ1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdh15Q99PJ1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdh15Q99PJ1 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC23.15■■□□□ 1.3
Pcdh15Q99PJ1 CT010467.1-202ENSMUST00000205406 714 ntBASIC23.15■■□□□ 1.3
Pcdh15Q99PJ1 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdh15Q99PJ1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdh15Q99PJ1 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Pcdh15Q99PJ1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Pcdh15Q99PJ1 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Pcdh15Q99PJ1 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Pcdh15Q99PJ1 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
Pcdh15Q99PJ1 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdh15Q99PJ1 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdh15Q99PJ1 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdh15Q99PJ1 Gm37856-201ENSMUST00000191634 999 ntBASIC23.14■■□□□ 1.29
Pcdh15Q99PJ1 Gm5408-201ENSMUST00000197998 747 ntBASIC23.14■■□□□ 1.29
Pcdh15Q99PJ1 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdh15Q99PJ1 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC23.13■■□□□ 1.29
Pcdh15Q99PJ1 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdh15Q99PJ1 Gm22325-201ENSMUST00000158904 308 ntBASIC23.13■■□□□ 1.29
Pcdh15Q99PJ1 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdh15Q99PJ1 Gm26524-201ENSMUST00000192339 390 ntBASIC23.13■■□□□ 1.29
Pcdh15Q99PJ1 Gm7290-201ENSMUST00000104990 617 ntBASIC23.12■■□□□ 1.29
Pcdh15Q99PJ1 Gm12918-201ENSMUST00000120234 636 ntBASIC23.12■■□□□ 1.29
Pcdh15Q99PJ1 Gm15710-201ENSMUST00000121821 636 ntBASIC23.12■■□□□ 1.29
Pcdh15Q99PJ1 Gm5075-201ENSMUST00000196916 622 ntBASIC23.12■■□□□ 1.29
Pcdh15Q99PJ1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC23.12■■□□□ 1.29
Pcdh15Q99PJ1 AC135637.1-201ENSMUST00000227750 365 ntBASIC23.12■■□□□ 1.29
Pcdh15Q99PJ1 AC122769.4-201ENSMUST00000228166 901 ntBASIC23.12■■□□□ 1.29
Pcdh15Q99PJ1 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC23.12■■□□□ 1.29
Pcdh15Q99PJ1 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC23.12■■□□□ 1.29
Pcdh15Q99PJ1 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdh15Q99PJ1 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
Pcdh15Q99PJ1 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdh15Q99PJ1 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Pcdh15Q99PJ1 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC23.11■■□□□ 1.29
Pcdh15Q99PJ1 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdh15Q99PJ1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdh15Q99PJ1 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdh15Q99PJ1 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdh15Q99PJ1 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC23.1■■□□□ 1.29
Pcdh15Q99PJ1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC23.1■■□□□ 1.29
Pcdh15Q99PJ1 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdh15Q99PJ1 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC23.09■■□□□ 1.29
Pcdh15Q99PJ1 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdh15Q99PJ1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdh15Q99PJ1 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdh15Q99PJ1 Gm3807-201ENSMUST00000193520 1168 ntBASIC23.09■■□□□ 1.29
Pcdh15Q99PJ1 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdh15Q99PJ1 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdh15Q99PJ1 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Pcdh15Q99PJ1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdh15Q99PJ1 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdh15Q99PJ1 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdh15Q99PJ1 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdh15Q99PJ1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdh15Q99PJ1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Pcdh15Q99PJ1 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC23.08■■□□□ 1.28
Pcdh15Q99PJ1 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdh15Q99PJ1 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdh15Q99PJ1 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdh15Q99PJ1 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdh15Q99PJ1 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdh15Q99PJ1 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdh15Q99PJ1 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdh15Q99PJ1 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdh15Q99PJ1 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdh15Q99PJ1 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdh15Q99PJ1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC23.06■■□□□ 1.28
Pcdh15Q99PJ1 Gm29241-201ENSMUST00000189260 1096 ntBASIC23.06■■□□□ 1.28
Pcdh15Q99PJ1 AC158538.1-201ENSMUST00000225870 294 ntBASIC23.06■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms