Protein–RNA interactions for Protein: Q91Y21

Pcdha1, Protocadherin alpha 1, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1Q91Y21 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdha1Q91Y21 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdha1Q91Y21 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdha1Q91Y21 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdha1Q91Y21 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Pcdha1Q91Y21 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdha1Q91Y21 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.81■□□□□ 0.92
Pcdha1Q91Y21 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Pcdha1Q91Y21 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdha1Q91Y21 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdha1Q91Y21 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdha1Q91Y21 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdha1Q91Y21 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdha1Q91Y21 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdha1Q91Y21 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Pcdha1Q91Y21 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdha1Q91Y21 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.8■□□□□ 0.92
Pcdha1Q91Y21 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.8■□□□□ 0.92
Pcdha1Q91Y21 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.8■□□□□ 0.92
Pcdha1Q91Y21 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdha1Q91Y21 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdha1Q91Y21 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdha1Q91Y21 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdha1Q91Y21 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdha1Q91Y21 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdha1Q91Y21 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdha1Q91Y21 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdha1Q91Y21 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdha1Q91Y21 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdha1Q91Y21 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdha1Q91Y21 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdha1Q91Y21 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdha1Q91Y21 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
Pcdha1Q91Y21 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdha1Q91Y21 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdha1Q91Y21 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Pcdha1Q91Y21 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdha1Q91Y21 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.78■□□□□ 0.92
Pcdha1Q91Y21 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdha1Q91Y21 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdha1Q91Y21 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdha1Q91Y21 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Pcdha1Q91Y21 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdha1Q91Y21 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdha1Q91Y21 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdha1Q91Y21 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.78■□□□□ 0.92
Pcdha1Q91Y21 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.78■□□□□ 0.92
Pcdha1Q91Y21 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdha1Q91Y21 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdha1Q91Y21 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdha1Q91Y21 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdha1Q91Y21 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdha1Q91Y21 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Pcdha1Q91Y21 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.77■□□□□ 0.92
Pcdha1Q91Y21 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdha1Q91Y21 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdha1Q91Y21 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdha1Q91Y21 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.77■□□□□ 0.91
Pcdha1Q91Y21 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Pcdha1Q91Y21 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Pcdha1Q91Y21 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdha1Q91Y21 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdha1Q91Y21 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdha1Q91Y21 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.76■□□□□ 0.91
Pcdha1Q91Y21 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Pcdha1Q91Y21 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdha1Q91Y21 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdha1Q91Y21 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdha1Q91Y21 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdha1Q91Y21 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.75■□□□□ 0.91
Pcdha1Q91Y21 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdha1Q91Y21 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Pcdha1Q91Y21 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdha1Q91Y21 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdha1Q91Y21 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.75■□□□□ 0.91
Pcdha1Q91Y21 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdha1Q91Y21 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Pcdha1Q91Y21 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdha1Q91Y21 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdha1Q91Y21 Gm26833-201ENSMUST00000180899 440 ntBASIC20.74■□□□□ 0.91
Pcdha1Q91Y21 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.74■□□□□ 0.91
Pcdha1Q91Y21 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdha1Q91Y21 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdha1Q91Y21 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Pcdha1Q91Y21 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.74■□□□□ 0.91
Pcdha1Q91Y21 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdha1Q91Y21 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdha1Q91Y21 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdha1Q91Y21 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdha1Q91Y21 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdha1Q91Y21 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdha1Q91Y21 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.73■□□□□ 0.91
Pcdha1Q91Y21 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdha1Q91Y21 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdha1Q91Y21 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdha1Q91Y21 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.73■□□□□ 0.91
Pcdha1Q91Y21 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.73■□□□□ 0.91
Pcdha1Q91Y21 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdha1Q91Y21 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdha1Q91Y21 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms