Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Pcdhb1Q91Y08 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb1Q91Y08 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb1Q91Y08 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb1Q91Y08 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb1Q91Y08 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb1Q91Y08 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.75■□□□□ 0.91
Pcdhb1Q91Y08 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb1Q91Y08 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Pcdhb1Q91Y08 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb1Q91Y08 Gm12922-201ENSMUST00000120626 809 ntBASIC20.75■□□□□ 0.91
Pcdhb1Q91Y08 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.75■□□□□ 0.91
Pcdhb1Q91Y08 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.75■□□□□ 0.91
Pcdhb1Q91Y08 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.75■□□□□ 0.91
Pcdhb1Q91Y08 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Pcdhb1Q91Y08 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb1Q91Y08 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb1Q91Y08 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb1Q91Y08 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb1Q91Y08 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb1Q91Y08 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb1Q91Y08 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Pcdhb1Q91Y08 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.74■□□□□ 0.91
Pcdhb1Q91Y08 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb1Q91Y08 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Pcdhb1Q91Y08 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb1Q91Y08 Golgb1-201ENSMUST00000023534 498 ntBASIC20.74■□□□□ 0.91
Pcdhb1Q91Y08 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb1Q91Y08 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb1Q91Y08 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb1Q91Y08 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb1Q91Y08 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Pcdhb1Q91Y08 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb1Q91Y08 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb1Q91Y08 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb1Q91Y08 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.73■□□□□ 0.91
Pcdhb1Q91Y08 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.73■□□□□ 0.91
Pcdhb1Q91Y08 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb1Q91Y08 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.73■□□□□ 0.91
Pcdhb1Q91Y08 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Pcdhb1Q91Y08 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb1Q91Y08 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb1Q91Y08 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb1Q91Y08 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb1Q91Y08 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb1Q91Y08 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb1Q91Y08 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb1Q91Y08 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb1Q91Y08 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.72■□□□□ 0.91
Pcdhb1Q91Y08 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.72■□□□□ 0.91
Pcdhb1Q91Y08 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.72■□□□□ 0.91
Pcdhb1Q91Y08 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Pcdhb1Q91Y08 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.72■□□□□ 0.91
Pcdhb1Q91Y08 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.72■□□□□ 0.91
Pcdhb1Q91Y08 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb1Q91Y08 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb1Q91Y08 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb1Q91Y08 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb1Q91Y08 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb1Q91Y08 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb1Q91Y08 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
Pcdhb1Q91Y08 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb1Q91Y08 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb1Q91Y08 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Pcdhb1Q91Y08 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.71■□□□□ 0.91
Pcdhb1Q91Y08 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb1Q91Y08 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.71■□□□□ 0.91
Pcdhb1Q91Y08 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Pcdhb1Q91Y08 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb1Q91Y08 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Pcdhb1Q91Y08 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb1Q91Y08 Notumos-201ENSMUST00000151998 2659 ntBASIC20.71■□□□□ 0.91
Pcdhb1Q91Y08 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Pcdhb1Q91Y08 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Pcdhb1Q91Y08 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb1Q91Y08 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb1Q91Y08 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.7■□□□□ 0.9
Pcdhb1Q91Y08 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb1Q91Y08 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Pcdhb1Q91Y08 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb1Q91Y08 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb1Q91Y08 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb1Q91Y08 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Pcdhb1Q91Y08 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Pcdhb1Q91Y08 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.68■□□□□ 0.9
Pcdhb1Q91Y08 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb1Q91Y08 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb1Q91Y08 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb1Q91Y08 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.68■□□□□ 0.9
Pcdhb1Q91Y08 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.68■□□□□ 0.9
Pcdhb1Q91Y08 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb1Q91Y08 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Pcdhb1Q91Y08 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb1Q91Y08 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Pcdhb1Q91Y08 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb1Q91Y08 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Pcdhb1Q91Y08 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Pcdhb1Q91Y08 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb1Q91Y08 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb1Q91Y08 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms