Protein–RNA interactions for Protein: Q8R2I0

Foxe1, Forkhead box protein E1, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxe1Q8R2I0 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
Foxe1Q8R2I0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.78■□□□□ 0.92
Foxe1Q8R2I0 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Foxe1Q8R2I0 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Foxe1Q8R2I0 Gm5408-201ENSMUST00000197998 747 ntBASIC20.78■□□□□ 0.92
Foxe1Q8R2I0 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.78■□□□□ 0.92
Foxe1Q8R2I0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Foxe1Q8R2I0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Foxe1Q8R2I0 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Foxe1Q8R2I0 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Foxe1Q8R2I0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Foxe1Q8R2I0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Foxe1Q8R2I0 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Foxe1Q8R2I0 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.77■□□□□ 0.92
Foxe1Q8R2I0 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.77■□□□□ 0.92
Foxe1Q8R2I0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Foxe1Q8R2I0 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Foxe1Q8R2I0 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
Foxe1Q8R2I0 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
Foxe1Q8R2I0 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Foxe1Q8R2I0 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Foxe1Q8R2I0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Foxe1Q8R2I0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Foxe1Q8R2I0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.76■□□□□ 0.91
Foxe1Q8R2I0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Foxe1Q8R2I0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Foxe1Q8R2I0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Foxe1Q8R2I0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Foxe1Q8R2I0 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Foxe1Q8R2I0 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Foxe1Q8R2I0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Foxe1Q8R2I0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Foxe1Q8R2I0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Foxe1Q8R2I0 Gm7290-201ENSMUST00000104990 617 ntBASIC20.75■□□□□ 0.91
Foxe1Q8R2I0 Gm12918-201ENSMUST00000120234 636 ntBASIC20.75■□□□□ 0.91
Foxe1Q8R2I0 Gm15710-201ENSMUST00000121821 636 ntBASIC20.75■□□□□ 0.91
Foxe1Q8R2I0 Mir6982-201ENSMUST00000184354 68 ntBASIC20.75■□□□□ 0.91
Foxe1Q8R2I0 Gm5075-201ENSMUST00000196916 622 ntBASIC20.75■□□□□ 0.91
Foxe1Q8R2I0 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.75■□□□□ 0.91
Foxe1Q8R2I0 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.75■□□□□ 0.91
Foxe1Q8R2I0 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Foxe1Q8R2I0 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Foxe1Q8R2I0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.75■□□□□ 0.91
Foxe1Q8R2I0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Foxe1Q8R2I0 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Foxe1Q8R2I0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Foxe1Q8R2I0 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Foxe1Q8R2I0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.74■□□□□ 0.91
Foxe1Q8R2I0 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.74■□□□□ 0.91
Foxe1Q8R2I0 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Foxe1Q8R2I0 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Foxe1Q8R2I0 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Foxe1Q8R2I0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Foxe1Q8R2I0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Foxe1Q8R2I0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.73■□□□□ 0.91
Foxe1Q8R2I0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.73■□□□□ 0.91
Foxe1Q8R2I0 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.73■□□□□ 0.91
Foxe1Q8R2I0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Foxe1Q8R2I0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Foxe1Q8R2I0 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Foxe1Q8R2I0 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Foxe1Q8R2I0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Foxe1Q8R2I0 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Foxe1Q8R2I0 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Foxe1Q8R2I0 Gm20049-201ENSMUST00000219950 730 ntBASIC20.72■□□□□ 0.91
Foxe1Q8R2I0 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Foxe1Q8R2I0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Foxe1Q8R2I0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Foxe1Q8R2I0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Foxe1Q8R2I0 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Foxe1Q8R2I0 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Foxe1Q8R2I0 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Foxe1Q8R2I0 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Foxe1Q8R2I0 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Foxe1Q8R2I0 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.71■□□□□ 0.91
Foxe1Q8R2I0 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Foxe1Q8R2I0 Gm13148-201ENSMUST00000118892 745 ntBASIC20.71■□□□□ 0.91
Foxe1Q8R2I0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Foxe1Q8R2I0 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.71■□□□□ 0.91
Foxe1Q8R2I0 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Foxe1Q8R2I0 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.91
Foxe1Q8R2I0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Foxe1Q8R2I0 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Foxe1Q8R2I0 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.7■□□□□ 0.9
Foxe1Q8R2I0 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.7■□□□□ 0.9
Foxe1Q8R2I0 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Foxe1Q8R2I0 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Foxe1Q8R2I0 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Foxe1Q8R2I0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Foxe1Q8R2I0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Foxe1Q8R2I0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Foxe1Q8R2I0 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Foxe1Q8R2I0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Foxe1Q8R2I0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.69■□□□□ 0.9
Foxe1Q8R2I0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Foxe1Q8R2I0 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.69■□□□□ 0.9
Foxe1Q8R2I0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.69■□□□□ 0.9
Foxe1Q8R2I0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Foxe1Q8R2I0 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Foxe1Q8R2I0 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms