Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rab43Q8CG50 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rab43Q8CG50 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Rab43Q8CG50 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rab43Q8CG50 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rab43Q8CG50 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Rab43Q8CG50 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
Rab43Q8CG50 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.47■□□□□ 0.71
Rab43Q8CG50 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.47■□□□□ 0.71
Rab43Q8CG50 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.47■□□□□ 0.71
Rab43Q8CG50 Gm37179-201ENSMUST00000194862 823 ntBASIC19.47■□□□□ 0.71
Rab43Q8CG50 AV356131-201ENSMUST00000206201 750 ntBASIC19.47■□□□□ 0.71
Rab43Q8CG50 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rab43Q8CG50 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rab43Q8CG50 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Rab43Q8CG50 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Rab43Q8CG50 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rab43Q8CG50 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rab43Q8CG50 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.46■□□□□ 0.71
Rab43Q8CG50 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.46■□□□□ 0.71
Rab43Q8CG50 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Rab43Q8CG50 Gm10033-202ENSMUST00000211874 928 ntBASIC19.46■□□□□ 0.71
Rab43Q8CG50 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rab43Q8CG50 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
Rab43Q8CG50 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.46■□□□□ 0.71
Rab43Q8CG50 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rab43Q8CG50 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rab43Q8CG50 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rab43Q8CG50 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rab43Q8CG50 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rab43Q8CG50 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rab43Q8CG50 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Rab43Q8CG50 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.45■□□□□ 0.7
Rab43Q8CG50 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rab43Q8CG50 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Rab43Q8CG50 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rab43Q8CG50 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rab43Q8CG50 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rab43Q8CG50 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.44■□□□□ 0.7
Rab43Q8CG50 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rab43Q8CG50 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rab43Q8CG50 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Rab43Q8CG50 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rab43Q8CG50 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rab43Q8CG50 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rab43Q8CG50 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rab43Q8CG50 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rab43Q8CG50 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rab43Q8CG50 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rab43Q8CG50 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.43■□□□□ 0.7
Rab43Q8CG50 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Rab43Q8CG50 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab43Q8CG50 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rab43Q8CG50 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab43Q8CG50 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab43Q8CG50 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab43Q8CG50 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab43Q8CG50 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab43Q8CG50 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab43Q8CG50 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Rab43Q8CG50 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab43Q8CG50 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rab43Q8CG50 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab43Q8CG50 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab43Q8CG50 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab43Q8CG50 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab43Q8CG50 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab43Q8CG50 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.41■□□□□ 0.7
Rab43Q8CG50 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.41■□□□□ 0.7
Rab43Q8CG50 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rab43Q8CG50 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rab43Q8CG50 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rab43Q8CG50 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rab43Q8CG50 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Rab43Q8CG50 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rab43Q8CG50 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rab43Q8CG50 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.4■□□□□ 0.7
Rab43Q8CG50 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rab43Q8CG50 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rab43Q8CG50 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rab43Q8CG50 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rab43Q8CG50 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rab43Q8CG50 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rab43Q8CG50 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Rab43Q8CG50 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Rab43Q8CG50 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Rab43Q8CG50 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rab43Q8CG50 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.39■□□□□ 0.69
Rab43Q8CG50 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Rab43Q8CG50 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.39■□□□□ 0.69
Rab43Q8CG50 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rab43Q8CG50 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rab43Q8CG50 Gm9988-201ENSMUST00000069786 435 ntBASIC19.39■□□□□ 0.69
Rab43Q8CG50 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Rab43Q8CG50 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rab43Q8CG50 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rab43Q8CG50 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.69
Rab43Q8CG50 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rab43Q8CG50 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rab43Q8CG50 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms