Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb7Q8CDY9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb7Q8CDY9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Pcdhb7Q8CDY9 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb7Q8CDY9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.92■□□□□ 0.78
Pcdhb7Q8CDY9 Gm22238-201ENSMUST00000175222 88 ntBASIC19.92■□□□□ 0.78
Pcdhb7Q8CDY9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb7Q8CDY9 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb7Q8CDY9 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb7Q8CDY9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Pcdhb7Q8CDY9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb7Q8CDY9 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb7Q8CDY9 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.91■□□□□ 0.78
Pcdhb7Q8CDY9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb7Q8CDY9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb7Q8CDY9 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb7Q8CDY9 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb7Q8CDY9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb7Q8CDY9 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Pcdhb7Q8CDY9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb7Q8CDY9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.9■□□□□ 0.78
Pcdhb7Q8CDY9 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.9■□□□□ 0.78
Pcdhb7Q8CDY9 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.9■□□□□ 0.78
Pcdhb7Q8CDY9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Pcdhb7Q8CDY9 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb7Q8CDY9 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb7Q8CDY9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb7Q8CDY9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb7Q8CDY9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb7Q8CDY9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb7Q8CDY9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb7Q8CDY9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb7Q8CDY9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb7Q8CDY9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Pcdhb7Q8CDY9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb7Q8CDY9 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.89■□□□□ 0.77
Pcdhb7Q8CDY9 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb7Q8CDY9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Pcdhb7Q8CDY9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb7Q8CDY9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.88■□□□□ 0.77
Pcdhb7Q8CDY9 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb7Q8CDY9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb7Q8CDY9 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.88■□□□□ 0.77
Pcdhb7Q8CDY9 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.88■□□□□ 0.77
Pcdhb7Q8CDY9 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb7Q8CDY9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb7Q8CDY9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb7Q8CDY9 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb7Q8CDY9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb7Q8CDY9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb7Q8CDY9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb7Q8CDY9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Pcdhb7Q8CDY9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Pcdhb7Q8CDY9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb7Q8CDY9 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb7Q8CDY9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb7Q8CDY9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb7Q8CDY9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb7Q8CDY9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Pcdhb7Q8CDY9 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb7Q8CDY9 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Pcdhb7Q8CDY9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.86■□□□□ 0.77
Pcdhb7Q8CDY9 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb7Q8CDY9 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb7Q8CDY9 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb7Q8CDY9 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Pcdhb7Q8CDY9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb7Q8CDY9 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
Pcdhb7Q8CDY9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb7Q8CDY9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.85■□□□□ 0.77
Pcdhb7Q8CDY9 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb7Q8CDY9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb7Q8CDY9 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
Pcdhb7Q8CDY9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb7Q8CDY9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Pcdhb7Q8CDY9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb7Q8CDY9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb7Q8CDY9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb7Q8CDY9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb7Q8CDY9 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.84■□□□□ 0.77
Pcdhb7Q8CDY9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb7Q8CDY9 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.84■□□□□ 0.77
Pcdhb7Q8CDY9 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.84■□□□□ 0.77
Pcdhb7Q8CDY9 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb7Q8CDY9 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.84■□□□□ 0.77
Pcdhb7Q8CDY9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb7Q8CDY9 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb7Q8CDY9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb7Q8CDY9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb7Q8CDY9 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.83■□□□□ 0.77
Pcdhb7Q8CDY9 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhb7Q8CDY9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Pcdhb7Q8CDY9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhb7Q8CDY9 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Pcdhb7Q8CDY9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhb7Q8CDY9 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.83■□□□□ 0.77
Pcdhb7Q8CDY9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhb7Q8CDY9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhb7Q8CDY9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhb7Q8CDY9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms