Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ska3Q8C263 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ska3Q8C263 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.71■□□□□ 0.59
Ska3Q8C263 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Ska3Q8C263 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ska3Q8C263 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Ska3Q8C263 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ska3Q8C263 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.7■□□□□ 0.58
Ska3Q8C263 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ska3Q8C263 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ska3Q8C263 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ska3Q8C263 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ska3Q8C263 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ska3Q8C263 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Ska3Q8C263 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ska3Q8C263 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.7■□□□□ 0.58
Ska3Q8C263 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ska3Q8C263 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ska3Q8C263 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ska3Q8C263 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Ska3Q8C263 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ska3Q8C263 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ska3Q8C263 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Ska3Q8C263 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.69■□□□□ 0.58
Ska3Q8C263 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ska3Q8C263 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.69■□□□□ 0.58
Ska3Q8C263 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ska3Q8C263 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Ska3Q8C263 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ska3Q8C263 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ska3Q8C263 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Ska3Q8C263 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ska3Q8C263 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ska3Q8C263 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ska3Q8C263 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Ska3Q8C263 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ska3Q8C263 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ska3Q8C263 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ska3Q8C263 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ska3Q8C263 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ska3Q8C263 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ska3Q8C263 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.68■□□□□ 0.58
Ska3Q8C263 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ska3Q8C263 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ska3Q8C263 Golph3-202ENSMUST00000226517 2359 ntBASIC18.67■□□□□ 0.58
Ska3Q8C263 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Ska3Q8C263 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ska3Q8C263 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ska3Q8C263 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ska3Q8C263 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.67■□□□□ 0.58
Ska3Q8C263 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.67■□□□□ 0.58
Ska3Q8C263 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ska3Q8C263 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Ska3Q8C263 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ska3Q8C263 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ska3Q8C263 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ska3Q8C263 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ska3Q8C263 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ska3Q8C263 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.66■□□□□ 0.58
Ska3Q8C263 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ska3Q8C263 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Ska3Q8C263 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ska3Q8C263 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Ska3Q8C263 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ska3Q8C263 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Ska3Q8C263 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Ska3Q8C263 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ska3Q8C263 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Ska3Q8C263 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ska3Q8C263 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ska3Q8C263 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ska3Q8C263 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ska3Q8C263 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ska3Q8C263 Gm12821-201ENSMUST00000120022 600 ntBASIC18.65■□□□□ 0.58
Ska3Q8C263 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.65■□□□□ 0.58
Ska3Q8C263 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ska3Q8C263 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ska3Q8C263 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.65■□□□□ 0.58
Ska3Q8C263 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ska3Q8C263 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ska3Q8C263 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ska3Q8C263 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Ska3Q8C263 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ska3Q8C263 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.65■□□□□ 0.58
Ska3Q8C263 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ska3Q8C263 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.64■□□□□ 0.57
Ska3Q8C263 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ska3Q8C263 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.64■□□□□ 0.57
Ska3Q8C263 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ska3Q8C263 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.64■□□□□ 0.57
Ska3Q8C263 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Ska3Q8C263 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
Ska3Q8C263 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ska3Q8C263 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ska3Q8C263 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ska3Q8C263 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ska3Q8C263 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Ska3Q8C263 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ska3Q8C263 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Ska3Q8C263 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms