Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC22.81■■□□□ 1.24
Trnp1Q80ZI1 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Trnp1Q80ZI1 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC22.81■■□□□ 1.24
Trnp1Q80ZI1 Gm10252-201ENSMUST00000209541 832 ntBASIC22.81■■□□□ 1.24
Trnp1Q80ZI1 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Trnp1Q80ZI1 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Trnp1Q80ZI1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
Trnp1Q80ZI1 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Trnp1Q80ZI1 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Trnp1Q80ZI1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Trnp1Q80ZI1 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Trnp1Q80ZI1 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Trnp1Q80ZI1 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
Trnp1Q80ZI1 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC22.8■■□□□ 1.24
Trnp1Q80ZI1 Gm8520-201ENSMUST00000186517 868 ntBASIC22.8■■□□□ 1.24
Trnp1Q80ZI1 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Trnp1Q80ZI1 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Trnp1Q80ZI1 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
Trnp1Q80ZI1 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Trnp1Q80ZI1 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Trnp1Q80ZI1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Trnp1Q80ZI1 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
Trnp1Q80ZI1 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Trnp1Q80ZI1 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Trnp1Q80ZI1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Trnp1Q80ZI1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC22.79■■□□□ 1.24
Trnp1Q80ZI1 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Trnp1Q80ZI1 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Trnp1Q80ZI1 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC22.79■■□□□ 1.24
Trnp1Q80ZI1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC22.78■■□□□ 1.24
Trnp1Q80ZI1 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Trnp1Q80ZI1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Trnp1Q80ZI1 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Trnp1Q80ZI1 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Trnp1Q80ZI1 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
Trnp1Q80ZI1 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC22.77■■□□□ 1.24
Trnp1Q80ZI1 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Trnp1Q80ZI1 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
Trnp1Q80ZI1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Trnp1Q80ZI1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Trnp1Q80ZI1 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Trnp1Q80ZI1 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Trnp1Q80ZI1 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Trnp1Q80ZI1 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Trnp1Q80ZI1 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Trnp1Q80ZI1 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Trnp1Q80ZI1 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Trnp1Q80ZI1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC22.75■■□□□ 1.23
Trnp1Q80ZI1 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Trnp1Q80ZI1 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Trnp1Q80ZI1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC22.74■■□□□ 1.23
Trnp1Q80ZI1 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Trnp1Q80ZI1 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC22.74■■□□□ 1.23
Trnp1Q80ZI1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Trnp1Q80ZI1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Trnp1Q80ZI1 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Trnp1Q80ZI1 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC22.73■■□□□ 1.23
Trnp1Q80ZI1 Gm13148-201ENSMUST00000118892 745 ntBASIC22.73■■□□□ 1.23
Trnp1Q80ZI1 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Trnp1Q80ZI1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC22.73■■□□□ 1.23
Trnp1Q80ZI1 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Trnp1Q80ZI1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Trnp1Q80ZI1 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Trnp1Q80ZI1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
Trnp1Q80ZI1 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Trnp1Q80ZI1 Gm7290-201ENSMUST00000104990 617 ntBASIC22.72■■□□□ 1.23
Trnp1Q80ZI1 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Trnp1Q80ZI1 Gm12918-201ENSMUST00000120234 636 ntBASIC22.72■■□□□ 1.23
Trnp1Q80ZI1 Gm15710-201ENSMUST00000121821 636 ntBASIC22.72■■□□□ 1.23
Trnp1Q80ZI1 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Trnp1Q80ZI1 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC22.72■■□□□ 1.23
Trnp1Q80ZI1 Gm5075-201ENSMUST00000196916 622 ntBASIC22.72■■□□□ 1.23
Trnp1Q80ZI1 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC22.72■■□□□ 1.23
Trnp1Q80ZI1 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC22.72■■□□□ 1.23
Trnp1Q80ZI1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Trnp1Q80ZI1 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC22.71■■□□□ 1.23
Trnp1Q80ZI1 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Trnp1Q80ZI1 Gm13146-201ENSMUST00000118508 780 ntBASIC22.71■■□□□ 1.23
Trnp1Q80ZI1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC22.71■■□□□ 1.23
Trnp1Q80ZI1 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Trnp1Q80ZI1 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Trnp1Q80ZI1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Trnp1Q80ZI1 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Trnp1Q80ZI1 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Trnp1Q80ZI1 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC22.7■■□□□ 1.22
Trnp1Q80ZI1 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Trnp1Q80ZI1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
Trnp1Q80ZI1 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Trnp1Q80ZI1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Trnp1Q80ZI1 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Trnp1Q80ZI1 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Trnp1Q80ZI1 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
Trnp1Q80ZI1 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC22.69■■□□□ 1.22
Trnp1Q80ZI1 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Trnp1Q80ZI1 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Trnp1Q80ZI1 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Trnp1Q80ZI1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Trnp1Q80ZI1 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trnp1Q80ZI1 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Trnp1Q80ZI1 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC22.68■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms