Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Srrm3Q80WV7 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Srrm3Q80WV7 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Srrm3Q80WV7 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Srrm3Q80WV7 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Srrm3Q80WV7 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Srrm3Q80WV7 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Srrm3Q80WV7 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Srrm3Q80WV7 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Srrm3Q80WV7 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Srrm3Q80WV7 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Srrm3Q80WV7 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.68■□□□□ 0.9
Srrm3Q80WV7 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Srrm3Q80WV7 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Srrm3Q80WV7 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Srrm3Q80WV7 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Srrm3Q80WV7 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Srrm3Q80WV7 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Srrm3Q80WV7 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Srrm3Q80WV7 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Srrm3Q80WV7 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Srrm3Q80WV7 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Srrm3Q80WV7 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Srrm3Q80WV7 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Srrm3Q80WV7 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Srrm3Q80WV7 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Srrm3Q80WV7 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Srrm3Q80WV7 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Srrm3Q80WV7 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.66■□□□□ 0.9
Srrm3Q80WV7 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Srrm3Q80WV7 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.66■□□□□ 0.9
Srrm3Q80WV7 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.66■□□□□ 0.9
Srrm3Q80WV7 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.66■□□□□ 0.9
Srrm3Q80WV7 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Srrm3Q80WV7 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Srrm3Q80WV7 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Srrm3Q80WV7 Gm10232-201ENSMUST00000089221 720 ntBASIC20.65■□□□□ 0.9
Srrm3Q80WV7 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.64■□□□□ 0.9
Srrm3Q80WV7 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Srrm3Q80WV7 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Srrm3Q80WV7 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.64■□□□□ 0.9
Srrm3Q80WV7 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Srrm3Q80WV7 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Srrm3Q80WV7 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.64■□□□□ 0.89
Srrm3Q80WV7 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Srrm3Q80WV7 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Srrm3Q80WV7 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Srrm3Q80WV7 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Srrm3Q80WV7 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Srrm3Q80WV7 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.63■□□□□ 0.89
Srrm3Q80WV7 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Srrm3Q80WV7 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Srrm3Q80WV7 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Srrm3Q80WV7 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Srrm3Q80WV7 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Srrm3Q80WV7 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Srrm3Q80WV7 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Srrm3Q80WV7 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Srrm3Q80WV7 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Srrm3Q80WV7 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Srrm3Q80WV7 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Srrm3Q80WV7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Srrm3Q80WV7 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Srrm3Q80WV7 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Srrm3Q80WV7 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Srrm3Q80WV7 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Srrm3Q80WV7 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Srrm3Q80WV7 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Srrm3Q80WV7 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.62■□□□□ 0.89
Srrm3Q80WV7 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Srrm3Q80WV7 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Srrm3Q80WV7 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Srrm3Q80WV7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Srrm3Q80WV7 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Srrm3Q80WV7 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Srrm3Q80WV7 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Srrm3Q80WV7 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.61■□□□□ 0.89
Srrm3Q80WV7 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Srrm3Q80WV7 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Srrm3Q80WV7 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Srrm3Q80WV7 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Srrm3Q80WV7 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Srrm3Q80WV7 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.61■□□□□ 0.89
Srrm3Q80WV7 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.61■□□□□ 0.89
Srrm3Q80WV7 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.61■□□□□ 0.89
Srrm3Q80WV7 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Srrm3Q80WV7 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Srrm3Q80WV7 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Srrm3Q80WV7 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Srrm3Q80WV7 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Srrm3Q80WV7 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Srrm3Q80WV7 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Srrm3Q80WV7 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Srrm3Q80WV7 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.6■□□□□ 0.89
Srrm3Q80WV7 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Srrm3Q80WV7 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Srrm3Q80WV7 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Srrm3Q80WV7 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
Srrm3Q80WV7 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.59■□□□□ 0.89
Srrm3Q80WV7 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms