Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc85bQ6PDY0 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.78■□□□□ 0.92
Ccdc85bQ6PDY0 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.78■□□□□ 0.92
Ccdc85bQ6PDY0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.78■□□□□ 0.92
Ccdc85bQ6PDY0 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc85bQ6PDY0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Ccdc85bQ6PDY0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc85bQ6PDY0 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc85bQ6PDY0 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.78■□□□□ 0.92
Ccdc85bQ6PDY0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc85bQ6PDY0 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.77■□□□□ 0.92
Ccdc85bQ6PDY0 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc85bQ6PDY0 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc85bQ6PDY0 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc85bQ6PDY0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc85bQ6PDY0 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc85bQ6PDY0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc85bQ6PDY0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.77■□□□□ 0.92
Ccdc85bQ6PDY0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.77■□□□□ 0.92
Ccdc85bQ6PDY0 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Ccdc85bQ6PDY0 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
Ccdc85bQ6PDY0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc85bQ6PDY0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc85bQ6PDY0 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc85bQ6PDY0 Gm5408-201ENSMUST00000197998 747 ntBASIC20.76■□□□□ 0.91
Ccdc85bQ6PDY0 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc85bQ6PDY0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc85bQ6PDY0 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc85bQ6PDY0 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc85bQ6PDY0 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.75■□□□□ 0.91
Ccdc85bQ6PDY0 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Ccdc85bQ6PDY0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc85bQ6PDY0 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.75■□□□□ 0.91
Ccdc85bQ6PDY0 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.75■□□□□ 0.91
Ccdc85bQ6PDY0 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc85bQ6PDY0 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc85bQ6PDY0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc85bQ6PDY0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Ccdc85bQ6PDY0 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.74■□□□□ 0.91
Ccdc85bQ6PDY0 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc85bQ6PDY0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc85bQ6PDY0 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Ccdc85bQ6PDY0 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.74■□□□□ 0.91
Ccdc85bQ6PDY0 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc85bQ6PDY0 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc85bQ6PDY0 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.74■□□□□ 0.91
Ccdc85bQ6PDY0 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.74■□□□□ 0.91
Ccdc85bQ6PDY0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc85bQ6PDY0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc85bQ6PDY0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc85bQ6PDY0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc85bQ6PDY0 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Ccdc85bQ6PDY0 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc85bQ6PDY0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc85bQ6PDY0 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
Ccdc85bQ6PDY0 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.73■□□□□ 0.91
Ccdc85bQ6PDY0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc85bQ6PDY0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc85bQ6PDY0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc85bQ6PDY0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc85bQ6PDY0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Ccdc85bQ6PDY0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Ccdc85bQ6PDY0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc85bQ6PDY0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc85bQ6PDY0 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.72■□□□□ 0.91
Ccdc85bQ6PDY0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc85bQ6PDY0 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc85bQ6PDY0 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc85bQ6PDY0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.72■□□□□ 0.91
Ccdc85bQ6PDY0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Ccdc85bQ6PDY0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc85bQ6PDY0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc85bQ6PDY0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Ccdc85bQ6PDY0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc85bQ6PDY0 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc85bQ6PDY0 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.71■□□□□ 0.91
Ccdc85bQ6PDY0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.71■□□□□ 0.91
Ccdc85bQ6PDY0 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc85bQ6PDY0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc85bQ6PDY0 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Ccdc85bQ6PDY0 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc85bQ6PDY0 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc85bQ6PDY0 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc85bQ6PDY0 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.7■□□□□ 0.9
Ccdc85bQ6PDY0 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc85bQ6PDY0 Gm13836-201ENSMUST00000121159 501 ntBASIC20.7■□□□□ 0.9
Ccdc85bQ6PDY0 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.7■□□□□ 0.9
Ccdc85bQ6PDY0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc85bQ6PDY0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc85bQ6PDY0 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.7■□□□□ 0.9
Ccdc85bQ6PDY0 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc85bQ6PDY0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc85bQ6PDY0 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc85bQ6PDY0 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc85bQ6PDY0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Ccdc85bQ6PDY0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc85bQ6PDY0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc85bQ6PDY0 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc85bQ6PDY0 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc85bQ6PDY0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms