Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sp140Q6NSQ5 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Sp140Q6NSQ5 Rps24-207ENSMUST00000224568 714 ntBASIC20.26■□□□□ 0.83
Sp140Q6NSQ5 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sp140Q6NSQ5 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sp140Q6NSQ5 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sp140Q6NSQ5 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Sp140Q6NSQ5 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sp140Q6NSQ5 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sp140Q6NSQ5 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.25■□□□□ 0.83
Sp140Q6NSQ5 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sp140Q6NSQ5 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Sp140Q6NSQ5 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sp140Q6NSQ5 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Sp140Q6NSQ5 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sp140Q6NSQ5 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sp140Q6NSQ5 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sp140Q6NSQ5 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sp140Q6NSQ5 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sp140Q6NSQ5 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sp140Q6NSQ5 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sp140Q6NSQ5 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sp140Q6NSQ5 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Sp140Q6NSQ5 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sp140Q6NSQ5 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Sp140Q6NSQ5 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sp140Q6NSQ5 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Sp140Q6NSQ5 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sp140Q6NSQ5 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sp140Q6NSQ5 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sp140Q6NSQ5 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sp140Q6NSQ5 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.23■□□□□ 0.83
Sp140Q6NSQ5 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sp140Q6NSQ5 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.23■□□□□ 0.83
Sp140Q6NSQ5 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Sp140Q6NSQ5 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sp140Q6NSQ5 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sp140Q6NSQ5 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sp140Q6NSQ5 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sp140Q6NSQ5 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sp140Q6NSQ5 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Sp140Q6NSQ5 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sp140Q6NSQ5 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
Sp140Q6NSQ5 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.22■□□□□ 0.83
Sp140Q6NSQ5 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sp140Q6NSQ5 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Sp140Q6NSQ5 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Sp140Q6NSQ5 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Sp140Q6NSQ5 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Sp140Q6NSQ5 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sp140Q6NSQ5 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Sp140Q6NSQ5 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sp140Q6NSQ5 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.2■□□□□ 0.82
Sp140Q6NSQ5 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.2■□□□□ 0.82
Sp140Q6NSQ5 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sp140Q6NSQ5 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sp140Q6NSQ5 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sp140Q6NSQ5 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sp140Q6NSQ5 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sp140Q6NSQ5 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sp140Q6NSQ5 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.19■□□□□ 0.82
Sp140Q6NSQ5 Mir6236-201ENSMUST00000184437 123 ntBASIC20.19■□□□□ 0.82
Sp140Q6NSQ5 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.19■□□□□ 0.82
Sp140Q6NSQ5 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sp140Q6NSQ5 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sp140Q6NSQ5 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sp140Q6NSQ5 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sp140Q6NSQ5 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sp140Q6NSQ5 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sp140Q6NSQ5 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sp140Q6NSQ5 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Sp140Q6NSQ5 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Sp140Q6NSQ5 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sp140Q6NSQ5 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.18■□□□□ 0.82
Sp140Q6NSQ5 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sp140Q6NSQ5 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Sp140Q6NSQ5 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Sp140Q6NSQ5 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sp140Q6NSQ5 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sp140Q6NSQ5 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sp140Q6NSQ5 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sp140Q6NSQ5 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sp140Q6NSQ5 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sp140Q6NSQ5 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Sp140Q6NSQ5 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.17■□□□□ 0.82
Sp140Q6NSQ5 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sp140Q6NSQ5 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sp140Q6NSQ5 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sp140Q6NSQ5 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.16■□□□□ 0.82
Sp140Q6NSQ5 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sp140Q6NSQ5 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sp140Q6NSQ5 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sp140Q6NSQ5 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sp140Q6NSQ5 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sp140Q6NSQ5 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sp140Q6NSQ5 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sp140Q6NSQ5 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sp140Q6NSQ5 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Sp140Q6NSQ5 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sp140Q6NSQ5 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms