Protein–RNA interactions for Protein: Q6A078

Cep290, Centrosomal protein of 290 kDa, mousemouse

Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cep290Q6A078 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cep290Q6A078 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Cep290Q6A078 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cep290Q6A078 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cep290Q6A078 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cep290Q6A078 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cep290Q6A078 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.65■□□□□ 0.9
Cep290Q6A078 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Cep290Q6A078 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cep290Q6A078 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Cep290Q6A078 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Cep290Q6A078 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cep290Q6A078 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cep290Q6A078 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cep290Q6A078 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cep290Q6A078 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cep290Q6A078 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cep290Q6A078 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cep290Q6A078 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.63■□□□□ 0.89
Cep290Q6A078 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cep290Q6A078 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.63■□□□□ 0.89
Cep290Q6A078 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cep290Q6A078 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cep290Q6A078 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cep290Q6A078 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cep290Q6A078 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cep290Q6A078 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Cep290Q6A078 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cep290Q6A078 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cep290Q6A078 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cep290Q6A078 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Cep290Q6A078 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cep290Q6A078 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cep290Q6A078 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cep290Q6A078 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cep290Q6A078 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.62■□□□□ 0.89
Cep290Q6A078 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cep290Q6A078 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cep290Q6A078 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cep290Q6A078 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cep290Q6A078 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cep290Q6A078 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Cep290Q6A078 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.61■□□□□ 0.89
Cep290Q6A078 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cep290Q6A078 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
Cep290Q6A078 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cep290Q6A078 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cep290Q6A078 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Cep290Q6A078 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cep290Q6A078 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cep290Q6A078 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cep290Q6A078 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Cep290Q6A078 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.6■□□□□ 0.89
Cep290Q6A078 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cep290Q6A078 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cep290Q6A078 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cep290Q6A078 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cep290Q6A078 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Cep290Q6A078 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.59■□□□□ 0.89
Cep290Q6A078 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Cep290Q6A078 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cep290Q6A078 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cep290Q6A078 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cep290Q6A078 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.59■□□□□ 0.89
Cep290Q6A078 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cep290Q6A078 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.59■□□□□ 0.89
Cep290Q6A078 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cep290Q6A078 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.59■□□□□ 0.89
Cep290Q6A078 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.89
Cep290Q6A078 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cep290Q6A078 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cep290Q6A078 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Cep290Q6A078 Gm15565-201ENSMUST00000118890 427 ntBASIC20.58■□□□□ 0.89
Cep290Q6A078 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.58■□□□□ 0.89
Cep290Q6A078 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Cep290Q6A078 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cep290Q6A078 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Cep290Q6A078 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Cep290Q6A078 Gm6576-201ENSMUST00000169678 883 ntBASIC20.58■□□□□ 0.88
Cep290Q6A078 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cep290Q6A078 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cep290Q6A078 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cep290Q6A078 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cep290Q6A078 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Cep290Q6A078 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cep290Q6A078 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Cep290Q6A078 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Cep290Q6A078 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.56■□□□□ 0.88
Cep290Q6A078 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cep290Q6A078 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cep290Q6A078 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cep290Q6A078 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cep290Q6A078 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cep290Q6A078 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.55■□□□□ 0.88
Cep290Q6A078 Gm11643-201ENSMUST00000119578 864 ntBASIC20.55■□□□□ 0.88
Cep290Q6A078 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cep290Q6A078 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cep290Q6A078 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cep290Q6A078 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Cep290Q6A078 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms