Protein–RNA interactions for Protein: Q5S006

Lrrk2, Leucine-rich repeat serine/threonine-protein kinase 2, mousemouse

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrk2Q5S006 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.67■□□□□ 0.42
Lrrk2Q5S006 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Lrrk2Q5S006 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Lrrk2Q5S006 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lrrk2Q5S006 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Lrrk2Q5S006 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.67■□□□□ 0.42
Lrrk2Q5S006 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lrrk2Q5S006 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lrrk2Q5S006 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Lrrk2Q5S006 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lrrk2Q5S006 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lrrk2Q5S006 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Lrrk2Q5S006 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lrrk2Q5S006 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lrrk2Q5S006 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.66■□□□□ 0.42
Lrrk2Q5S006 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Lrrk2Q5S006 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lrrk2Q5S006 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lrrk2Q5S006 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lrrk2Q5S006 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lrrk2Q5S006 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lrrk2Q5S006 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.66■□□□□ 0.42
Lrrk2Q5S006 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lrrk2Q5S006 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lrrk2Q5S006 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Lrrk2Q5S006 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lrrk2Q5S006 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.66■□□□□ 0.42
Lrrk2Q5S006 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lrrk2Q5S006 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lrrk2Q5S006 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lrrk2Q5S006 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lrrk2Q5S006 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lrrk2Q5S006 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrrk2Q5S006 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrrk2Q5S006 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrrk2Q5S006 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Lrrk2Q5S006 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrrk2Q5S006 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.65■□□□□ 0.42
Lrrk2Q5S006 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrrk2Q5S006 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Lrrk2Q5S006 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.64■□□□□ 0.41
Lrrk2Q5S006 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Lrrk2Q5S006 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lrrk2Q5S006 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lrrk2Q5S006 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.64■□□□□ 0.41
Lrrk2Q5S006 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lrrk2Q5S006 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lrrk2Q5S006 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Lrrk2Q5S006 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lrrk2Q5S006 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Lrrk2Q5S006 Gm26524-201ENSMUST00000192339 390 ntBASIC17.63■□□□□ 0.41
Lrrk2Q5S006 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lrrk2Q5S006 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Lrrk2Q5S006 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lrrk2Q5S006 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.62■□□□□ 0.41
Lrrk2Q5S006 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lrrk2Q5S006 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lrrk2Q5S006 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Lrrk2Q5S006 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lrrk2Q5S006 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lrrk2Q5S006 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lrrk2Q5S006 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lrrk2Q5S006 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Lrrk2Q5S006 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Lrrk2Q5S006 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lrrk2Q5S006 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lrrk2Q5S006 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lrrk2Q5S006 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lrrk2Q5S006 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lrrk2Q5S006 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lrrk2Q5S006 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lrrk2Q5S006 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.61■□□□□ 0.41
Lrrk2Q5S006 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lrrk2Q5S006 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lrrk2Q5S006 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lrrk2Q5S006 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lrrk2Q5S006 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lrrk2Q5S006 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.61■□□□□ 0.41
Lrrk2Q5S006 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lrrk2Q5S006 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.61■□□□□ 0.41
Lrrk2Q5S006 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lrrk2Q5S006 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lrrk2Q5S006 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lrrk2Q5S006 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lrrk2Q5S006 Gm15565-201ENSMUST00000118890 427 ntBASIC17.6■□□□□ 0.41
Lrrk2Q5S006 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.6■□□□□ 0.41
Lrrk2Q5S006 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lrrk2Q5S006 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lrrk2Q5S006 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lrrk2Q5S006 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lrrk2Q5S006 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Lrrk2Q5S006 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.6■□□□□ 0.41
Lrrk2Q5S006 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Lrrk2Q5S006 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Lrrk2Q5S006 Gm10819-201ENSMUST00000099988 561 ntBASIC17.6■□□□□ 0.41
Lrrk2Q5S006 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lrrk2Q5S006 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lrrk2Q5S006 Gm13146-201ENSMUST00000118508 780 ntBASIC17.59■□□□□ 0.41
Lrrk2Q5S006 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrrk2Q5S006 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms