Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim80Q3V061 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim80Q3V061 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Trim80Q3V061 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim80Q3V061 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim80Q3V061 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim80Q3V061 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim80Q3V061 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trim80Q3V061 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trim80Q3V061 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim80Q3V061 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Trim80Q3V061 Gm7417-201ENSMUST00000192950 473 ntBASIC20.38■□□□□ 0.85
Trim80Q3V061 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.38■□□□□ 0.85
Trim80Q3V061 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim80Q3V061 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim80Q3V061 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Trim80Q3V061 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim80Q3V061 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim80Q3V061 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trim80Q3V061 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim80Q3V061 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim80Q3V061 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim80Q3V061 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim80Q3V061 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim80Q3V061 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim80Q3V061 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.37■□□□□ 0.85
Trim80Q3V061 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim80Q3V061 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.37■□□□□ 0.85
Trim80Q3V061 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim80Q3V061 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Trim80Q3V061 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim80Q3V061 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim80Q3V061 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.37■□□□□ 0.85
Trim80Q3V061 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim80Q3V061 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Trim80Q3V061 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim80Q3V061 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim80Q3V061 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim80Q3V061 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim80Q3V061 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim80Q3V061 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trim80Q3V061 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim80Q3V061 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim80Q3V061 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim80Q3V061 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim80Q3V061 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim80Q3V061 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.35■□□□□ 0.85
Trim80Q3V061 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.35■□□□□ 0.85
Trim80Q3V061 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim80Q3V061 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.35■□□□□ 0.85
Trim80Q3V061 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim80Q3V061 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trim80Q3V061 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim80Q3V061 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim80Q3V061 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim80Q3V061 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.34■□□□□ 0.85
Trim80Q3V061 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Trim80Q3V061 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim80Q3V061 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim80Q3V061 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.34■□□□□ 0.85
Trim80Q3V061 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.34■□□□□ 0.85
Trim80Q3V061 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim80Q3V061 Gm13241-201ENSMUST00000094493 780 ntBASIC20.34■□□□□ 0.85
Trim80Q3V061 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim80Q3V061 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim80Q3V061 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.33■□□□□ 0.85
Trim80Q3V061 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim80Q3V061 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Trim80Q3V061 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.33■□□□□ 0.85
Trim80Q3V061 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim80Q3V061 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.33■□□□□ 0.85
Trim80Q3V061 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim80Q3V061 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim80Q3V061 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim80Q3V061 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim80Q3V061 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim80Q3V061 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.33■□□□□ 0.85
Trim80Q3V061 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Trim80Q3V061 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Trim80Q3V061 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trim80Q3V061 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim80Q3V061 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim80Q3V061 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.32■□□□□ 0.84
Trim80Q3V061 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.32■□□□□ 0.84
Trim80Q3V061 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim80Q3V061 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.32■□□□□ 0.84
Trim80Q3V061 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Trim80Q3V061 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim80Q3V061 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim80Q3V061 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim80Q3V061 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim80Q3V061 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Trim80Q3V061 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim80Q3V061 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.31■□□□□ 0.84
Trim80Q3V061 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trim80Q3V061 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim80Q3V061 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim80Q3V061 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Trim80Q3V061 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.31■□□□□ 0.84
Trim80Q3V061 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms