Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Cdkl5Q3UTQ8 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cdkl5Q3UTQ8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC23.11■■□□□ 1.29
Cdkl5Q3UTQ8 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Cdkl5Q3UTQ8 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cdkl5Q3UTQ8 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC23.1■■□□□ 1.29
Cdkl5Q3UTQ8 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cdkl5Q3UTQ8 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Cdkl5Q3UTQ8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC23.1■■□□□ 1.29
Cdkl5Q3UTQ8 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cdkl5Q3UTQ8 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cdkl5Q3UTQ8 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cdkl5Q3UTQ8 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cdkl5Q3UTQ8 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cdkl5Q3UTQ8 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
Cdkl5Q3UTQ8 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cdkl5Q3UTQ8 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC23.09■■□□□ 1.29
Cdkl5Q3UTQ8 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Cdkl5Q3UTQ8 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Cdkl5Q3UTQ8 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Cdkl5Q3UTQ8 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cdkl5Q3UTQ8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cdkl5Q3UTQ8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Cdkl5Q3UTQ8 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cdkl5Q3UTQ8 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Cdkl5Q3UTQ8 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Cdkl5Q3UTQ8 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Cdkl5Q3UTQ8 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Cdkl5Q3UTQ8 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Cdkl5Q3UTQ8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC23.08■■□□□ 1.28
Cdkl5Q3UTQ8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Cdkl5Q3UTQ8 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Cdkl5Q3UTQ8 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Cdkl5Q3UTQ8 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Cdkl5Q3UTQ8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cdkl5Q3UTQ8 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cdkl5Q3UTQ8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Cdkl5Q3UTQ8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Cdkl5Q3UTQ8 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cdkl5Q3UTQ8 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Cdkl5Q3UTQ8 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
Cdkl5Q3UTQ8 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cdkl5Q3UTQ8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cdkl5Q3UTQ8 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Cdkl5Q3UTQ8 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cdkl5Q3UTQ8 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Cdkl5Q3UTQ8 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC23.07■■□□□ 1.28
Cdkl5Q3UTQ8 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cdkl5Q3UTQ8 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Cdkl5Q3UTQ8 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Cdkl5Q3UTQ8 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cdkl5Q3UTQ8 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cdkl5Q3UTQ8 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cdkl5Q3UTQ8 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Cdkl5Q3UTQ8 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cdkl5Q3UTQ8 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Cdkl5Q3UTQ8 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cdkl5Q3UTQ8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cdkl5Q3UTQ8 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cdkl5Q3UTQ8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cdkl5Q3UTQ8 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Cdkl5Q3UTQ8 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC23.04■■□□□ 1.28
Cdkl5Q3UTQ8 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cdkl5Q3UTQ8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cdkl5Q3UTQ8 Gm9847-201ENSMUST00000052528 599 ntBASIC23.04■■□□□ 1.28
Cdkl5Q3UTQ8 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cdkl5Q3UTQ8 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cdkl5Q3UTQ8 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC23.03■■□□□ 1.28
Cdkl5Q3UTQ8 Gm15043-201ENSMUST00000118843 1543 ntBASIC23.03■■□□□ 1.28
Cdkl5Q3UTQ8 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Cdkl5Q3UTQ8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cdkl5Q3UTQ8 Gm27045-201ENSMUST00000182145 1402 ntBASIC23.03■■□□□ 1.28
Cdkl5Q3UTQ8 Gm43909-201ENSMUST00000203443 1876 ntBASIC23.02■■□□□ 1.28
Cdkl5Q3UTQ8 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cdkl5Q3UTQ8 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC23.02■■□□□ 1.28
Cdkl5Q3UTQ8 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cdkl5Q3UTQ8 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cdkl5Q3UTQ8 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cdkl5Q3UTQ8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cdkl5Q3UTQ8 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cdkl5Q3UTQ8 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cdkl5Q3UTQ8 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cdkl5Q3UTQ8 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Cdkl5Q3UTQ8 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC23.02■■□□□ 1.28
Cdkl5Q3UTQ8 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cdkl5Q3UTQ8 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC23.02■■□□□ 1.28
Cdkl5Q3UTQ8 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC23.02■■□□□ 1.28
Cdkl5Q3UTQ8 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cdkl5Q3UTQ8 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cdkl5Q3UTQ8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Cdkl5Q3UTQ8 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cdkl5Q3UTQ8 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Cdkl5Q3UTQ8 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cdkl5Q3UTQ8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Cdkl5Q3UTQ8 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC23■■□□□ 1.27
Cdkl5Q3UTQ8 Gm34220-201ENSMUST00000223001 2709 ntBASIC23■■□□□ 1.27
Cdkl5Q3UTQ8 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Cdkl5Q3UTQ8 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC23■■□□□ 1.27
Cdkl5Q3UTQ8 Gm9207-201ENSMUST00000198773 1115 ntBASIC23■■□□□ 1.27
Cdkl5Q3UTQ8 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC23■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms