Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Khdc4Q3TCX3 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.87■□□□□ 0.61
Khdc4Q3TCX3 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.87■□□□□ 0.61
Khdc4Q3TCX3 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
Khdc4Q3TCX3 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.87■□□□□ 0.61
Khdc4Q3TCX3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Khdc4Q3TCX3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Khdc4Q3TCX3 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Khdc4Q3TCX3 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Khdc4Q3TCX3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Khdc4Q3TCX3 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Khdc4Q3TCX3 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Khdc4Q3TCX3 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Khdc4Q3TCX3 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Khdc4Q3TCX3 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Khdc4Q3TCX3 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Khdc4Q3TCX3 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.86■□□□□ 0.61
Khdc4Q3TCX3 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Khdc4Q3TCX3 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.86■□□□□ 0.61
Khdc4Q3TCX3 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Khdc4Q3TCX3 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Khdc4Q3TCX3 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Khdc4Q3TCX3 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Khdc4Q3TCX3 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Khdc4Q3TCX3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.85■□□□□ 0.61
Khdc4Q3TCX3 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Khdc4Q3TCX3 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Khdc4Q3TCX3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Khdc4Q3TCX3 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Khdc4Q3TCX3 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.85■□□□□ 0.61
Khdc4Q3TCX3 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.85■□□□□ 0.61
Khdc4Q3TCX3 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Khdc4Q3TCX3 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Khdc4Q3TCX3 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Khdc4Q3TCX3 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Khdc4Q3TCX3 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.84■□□□□ 0.61
Khdc4Q3TCX3 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Khdc4Q3TCX3 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.84■□□□□ 0.61
Khdc4Q3TCX3 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Khdc4Q3TCX3 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Khdc4Q3TCX3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Khdc4Q3TCX3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Khdc4Q3TCX3 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Khdc4Q3TCX3 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Khdc4Q3TCX3 Notumos-201ENSMUST00000151998 2659 ntBASIC18.83■□□□□ 0.61
Khdc4Q3TCX3 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Khdc4Q3TCX3 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Khdc4Q3TCX3 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Khdc4Q3TCX3 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Khdc4Q3TCX3 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Khdc4Q3TCX3 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
Khdc4Q3TCX3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Khdc4Q3TCX3 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Khdc4Q3TCX3 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Khdc4Q3TCX3 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Khdc4Q3TCX3 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.82■□□□□ 0.6
Khdc4Q3TCX3 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Khdc4Q3TCX3 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Khdc4Q3TCX3 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Khdc4Q3TCX3 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.82■□□□□ 0.6
Khdc4Q3TCX3 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Khdc4Q3TCX3 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Khdc4Q3TCX3 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Khdc4Q3TCX3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Khdc4Q3TCX3 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Khdc4Q3TCX3 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Khdc4Q3TCX3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Khdc4Q3TCX3 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Khdc4Q3TCX3 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Khdc4Q3TCX3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Khdc4Q3TCX3 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Khdc4Q3TCX3 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Khdc4Q3TCX3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Khdc4Q3TCX3 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Khdc4Q3TCX3 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Khdc4Q3TCX3 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Khdc4Q3TCX3 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Khdc4Q3TCX3 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Khdc4Q3TCX3 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Khdc4Q3TCX3 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Khdc4Q3TCX3 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Khdc4Q3TCX3 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Khdc4Q3TCX3 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Khdc4Q3TCX3 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.8■□□□□ 0.6
Khdc4Q3TCX3 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Khdc4Q3TCX3 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Khdc4Q3TCX3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Khdc4Q3TCX3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Khdc4Q3TCX3 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Khdc4Q3TCX3 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Khdc4Q3TCX3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Khdc4Q3TCX3 Gm12251-201ENSMUST00000117893 792 ntBASIC18.79■□□□□ 0.6
Khdc4Q3TCX3 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Khdc4Q3TCX3 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Khdc4Q3TCX3 Gm43173-201ENSMUST00000202246 593 ntBASIC18.79■□□□□ 0.6
Khdc4Q3TCX3 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Khdc4Q3TCX3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Khdc4Q3TCX3 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Khdc4Q3TCX3 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Khdc4Q3TCX3 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms