Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
PrkdcP97313 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
PrkdcP97313 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
PrkdcP97313 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
PrkdcP97313 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
PrkdcP97313 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
PrkdcP97313 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PrkdcP97313 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC13.99□□□□□ -0.17
PrkdcP97313 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
PrkdcP97313 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PrkdcP97313 Gm6365-201ENSMUST00000054711 744 ntBASIC13.99□□□□□ -0.17
PrkdcP97313 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PrkdcP97313 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PrkdcP97313 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PrkdcP97313 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PrkdcP97313 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC13.99□□□□□ -0.17
PrkdcP97313 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PrkdcP97313 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC13.99□□□□□ -0.17
PrkdcP97313 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PrkdcP97313 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
PrkdcP97313 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
PrkdcP97313 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PrkdcP97313 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PrkdcP97313 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PrkdcP97313 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PrkdcP97313 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PrkdcP97313 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
PrkdcP97313 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC13.98□□□□□ -0.17
PrkdcP97313 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PrkdcP97313 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
PrkdcP97313 Gm11643-201ENSMUST00000119578 864 ntBASIC13.98□□□□□ -0.17
PrkdcP97313 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PrkdcP97313 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.98□□□□□ -0.17
PrkdcP97313 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC13.98□□□□□ -0.17
PrkdcP97313 CT030146.1-201ENSMUST00000220919 217 ntBASIC13.98□□□□□ -0.17
PrkdcP97313 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC13.98□□□□□ -0.17
PrkdcP97313 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
PrkdcP97313 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PrkdcP97313 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PrkdcP97313 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
PrkdcP97313 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC13.97□□□□□ -0.17
PrkdcP97313 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
PrkdcP97313 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
PrkdcP97313 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PrkdcP97313 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PrkdcP97313 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PrkdcP97313 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PrkdcP97313 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
PrkdcP97313 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
PrkdcP97313 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PrkdcP97313 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PrkdcP97313 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
PrkdcP97313 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PrkdcP97313 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PrkdcP97313 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PrkdcP97313 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
PrkdcP97313 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PrkdcP97313 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
PrkdcP97313 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PrkdcP97313 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PrkdcP97313 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PrkdcP97313 Gm13146-201ENSMUST00000118508 780 ntBASIC13.96□□□□□ -0.17
PrkdcP97313 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
PrkdcP97313 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PrkdcP97313 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PrkdcP97313 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
PrkdcP97313 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC13.96□□□□□ -0.18
PrkdcP97313 Gm6420-201ENSMUST00000193885 723 ntBASIC13.96□□□□□ -0.18
PrkdcP97313 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PrkdcP97313 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
PrkdcP97313 Gm10655-201ENSMUST00000098658 1397 ntBASIC13.96□□□□□ -0.18
PrkdcP97313 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PrkdcP97313 AC153881.1-201ENSMUST00000214448 284 ntBASIC13.95□□□□□ -0.18
PrkdcP97313 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PrkdcP97313 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
PrkdcP97313 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC13.95□□□□□ -0.18
PrkdcP97313 AC121577.1-201ENSMUST00000227302 707 ntBASIC13.95□□□□□ -0.18
PrkdcP97313 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PrkdcP97313 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PrkdcP97313 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PrkdcP97313 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PrkdcP97313 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PrkdcP97313 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PrkdcP97313 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PrkdcP97313 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PrkdcP97313 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PrkdcP97313 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC13.94□□□□□ -0.18
PrkdcP97313 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PrkdcP97313 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC13.94□□□□□ -0.18
PrkdcP97313 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PrkdcP97313 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PrkdcP97313 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PrkdcP97313 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PrkdcP97313 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
PrkdcP97313 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
PrkdcP97313 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
PrkdcP97313 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC13.93□□□□□ -0.18
PrkdcP97313 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
PrkdcP97313 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
PrkdcP97313 Gm5643-201ENSMUST00000117081 966 ntBASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms