Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
ThraP63058 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.07■□□□□ 0.8
ThraP63058 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ThraP63058 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ThraP63058 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ThraP63058 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ThraP63058 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ThraP63058 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ThraP63058 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ThraP63058 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
ThraP63058 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ThraP63058 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ThraP63058 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ThraP63058 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ThraP63058 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ThraP63058 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
ThraP63058 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ThraP63058 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ThraP63058 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ThraP63058 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ThraP63058 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.05■□□□□ 0.8
ThraP63058 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ThraP63058 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ThraP63058 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ThraP63058 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.05■□□□□ 0.8
ThraP63058 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ThraP63058 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ThraP63058 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ThraP63058 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ThraP63058 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
ThraP63058 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ThraP63058 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ThraP63058 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ThraP63058 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.04■□□□□ 0.8
ThraP63058 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ThraP63058 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ThraP63058 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ThraP63058 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ThraP63058 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ThraP63058 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ThraP63058 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ThraP63058 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ThraP63058 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ThraP63058 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ThraP63058 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ThraP63058 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.03■□□□□ 0.8
ThraP63058 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.03■□□□□ 0.8
ThraP63058 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ThraP63058 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.03■□□□□ 0.8
ThraP63058 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ThraP63058 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ThraP63058 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
ThraP63058 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ThraP63058 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ThraP63058 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
ThraP63058 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
ThraP63058 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ThraP63058 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.79
ThraP63058 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
ThraP63058 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ThraP63058 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ThraP63058 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ThraP63058 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.01■□□□□ 0.79
ThraP63058 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
ThraP63058 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
ThraP63058 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ThraP63058 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.01■□□□□ 0.79
ThraP63058 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.01■□□□□ 0.79
ThraP63058 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ThraP63058 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ThraP63058 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ThraP63058 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ThraP63058 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
ThraP63058 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20■□□□□ 0.79
ThraP63058 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20■□□□□ 0.79
ThraP63058 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ThraP63058 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
ThraP63058 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
ThraP63058 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ThraP63058 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ThraP63058 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20■□□□□ 0.79
ThraP63058 Golph3-202ENSMUST00000226517 2359 ntBASIC20■□□□□ 0.79
ThraP63058 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.99■□□□□ 0.79
ThraP63058 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ThraP63058 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.99■□□□□ 0.79
ThraP63058 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
ThraP63058 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ThraP63058 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
ThraP63058 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
ThraP63058 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ThraP63058 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ThraP63058 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ThraP63058 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ThraP63058 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ThraP63058 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ThraP63058 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ThraP63058 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ThraP63058 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ThraP63058 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ThraP63058 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms