Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ybx1P62960 Gm11421-201ENSMUST00000122124 294 ntBASIC20.54■□□□□ 0.88
Ybx1P62960 AV356131-201ENSMUST00000206201 750 ntBASIC20.54■□□□□ 0.88
Ybx1P62960 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ybx1P62960 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.54■□□□□ 0.88
Ybx1P62960 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.54■□□□□ 0.88
Ybx1P62960 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ybx1P62960 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ybx1P62960 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
Ybx1P62960 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ybx1P62960 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Ybx1P62960 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.53■□□□□ 0.88
Ybx1P62960 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ybx1P62960 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ybx1P62960 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ybx1P62960 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ybx1P62960 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.52■□□□□ 0.88
Ybx1P62960 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ybx1P62960 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ybx1P62960 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ybx1P62960 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Ybx1P62960 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Ybx1P62960 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ybx1P62960 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Ybx1P62960 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
Ybx1P62960 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Ybx1P62960 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.5■□□□□ 0.87
Ybx1P62960 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.5■□□□□ 0.87
Ybx1P62960 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Ybx1P62960 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ybx1P62960 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ybx1P62960 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ybx1P62960 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ybx1P62960 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.49■□□□□ 0.87
Ybx1P62960 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ybx1P62960 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ybx1P62960 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ybx1P62960 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ybx1P62960 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Ybx1P62960 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ybx1P62960 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ybx1P62960 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ybx1P62960 Gm42778-201ENSMUST00000199644 553 ntBASIC20.48■□□□□ 0.87
Ybx1P62960 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.48■□□□□ 0.87
Ybx1P62960 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ybx1P62960 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ybx1P62960 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ybx1P62960 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Ybx1P62960 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Ybx1P62960 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ybx1P62960 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.48■□□□□ 0.87
Ybx1P62960 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ybx1P62960 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ybx1P62960 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ybx1P62960 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ybx1P62960 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ybx1P62960 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ybx1P62960 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ybx1P62960 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ybx1P62960 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.46■□□□□ 0.87
Ybx1P62960 Gm27011-201ENSMUST00000182352 972 ntBASIC20.46■□□□□ 0.87
Ybx1P62960 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Ybx1P62960 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ybx1P62960 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Ybx1P62960 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ybx1P62960 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ybx1P62960 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ybx1P62960 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ybx1P62960 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.45■□□□□ 0.86
Ybx1P62960 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ybx1P62960 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ybx1P62960 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ybx1P62960 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ybx1P62960 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ybx1P62960 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.44■□□□□ 0.86
Ybx1P62960 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ybx1P62960 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ybx1P62960 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ybx1P62960 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.44■□□□□ 0.86
Ybx1P62960 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ybx1P62960 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ybx1P62960 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ybx1P62960 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ybx1P62960 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ybx1P62960 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ybx1P62960 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ybx1P62960 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Ybx1P62960 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.43■□□□□ 0.86
Ybx1P62960 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.43■□□□□ 0.86
Ybx1P62960 Mir6236-201ENSMUST00000184437 123 ntBASIC20.43■□□□□ 0.86
Ybx1P62960 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.43■□□□□ 0.86
Ybx1P62960 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.43■□□□□ 0.86
Ybx1P62960 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ybx1P62960 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ybx1P62960 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ybx1P62960 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ybx1P62960 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ybx1P62960 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ybx1P62960 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ybx1P62960 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms