Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.31■□□□□ 0.84
Lhx3P50481 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lhx3P50481 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.31■□□□□ 0.84
Lhx3P50481 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Lhx3P50481 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lhx3P50481 Gm43017-201ENSMUST00000198296 752 ntBASIC20.31■□□□□ 0.84
Lhx3P50481 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.31■□□□□ 0.84
Lhx3P50481 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lhx3P50481 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.3■□□□□ 0.84
Lhx3P50481 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lhx3P50481 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lhx3P50481 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.3■□□□□ 0.84
Lhx3P50481 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
Lhx3P50481 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lhx3P50481 Serp2-204ENSMUST00000228055 705 ntBASIC20.3■□□□□ 0.84
Lhx3P50481 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lhx3P50481 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
Lhx3P50481 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lhx3P50481 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.29■□□□□ 0.84
Lhx3P50481 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Lhx3P50481 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lhx3P50481 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.29■□□□□ 0.84
Lhx3P50481 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lhx3P50481 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.29■□□□□ 0.84
Lhx3P50481 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Lhx3P50481 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lhx3P50481 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lhx3P50481 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Lhx3P50481 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lhx3P50481 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
Lhx3P50481 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.28■□□□□ 0.84
Lhx3P50481 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lhx3P50481 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.28■□□□□ 0.84
Lhx3P50481 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lhx3P50481 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lhx3P50481 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lhx3P50481 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.27■□□□□ 0.84
Lhx3P50481 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Lhx3P50481 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lhx3P50481 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Lhx3P50481 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lhx3P50481 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Lhx3P50481 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Lhx3P50481 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lhx3P50481 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.27■□□□□ 0.84
Lhx3P50481 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Lhx3P50481 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Lhx3P50481 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.27■□□□□ 0.83
Lhx3P50481 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Lhx3P50481 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lhx3P50481 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lhx3P50481 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.26■□□□□ 0.83
Lhx3P50481 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.26■□□□□ 0.83
Lhx3P50481 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lhx3P50481 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lhx3P50481 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Lhx3P50481 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.26■□□□□ 0.83
Lhx3P50481 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.26■□□□□ 0.83
Lhx3P50481 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lhx3P50481 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Lhx3P50481 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lhx3P50481 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lhx3P50481 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lhx3P50481 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lhx3P50481 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lhx3P50481 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.25■□□□□ 0.83
Lhx3P50481 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lhx3P50481 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lhx3P50481 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Lhx3P50481 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lhx3P50481 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lhx3P50481 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lhx3P50481 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.24■□□□□ 0.83
Lhx3P50481 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lhx3P50481 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lhx3P50481 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Lhx3P50481 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lhx3P50481 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.24■□□□□ 0.83
Lhx3P50481 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.24■□□□□ 0.83
Lhx3P50481 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lhx3P50481 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Lhx3P50481 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lhx3P50481 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lhx3P50481 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lhx3P50481 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Lhx3P50481 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.23■□□□□ 0.83
Lhx3P50481 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lhx3P50481 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.23■□□□□ 0.83
Lhx3P50481 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lhx3P50481 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
Lhx3P50481 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.23■□□□□ 0.83
Lhx3P50481 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lhx3P50481 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lhx3P50481 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.22■□□□□ 0.83
Lhx3P50481 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Lhx3P50481 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lhx3P50481 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Lhx3P50481 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lhx3P50481 Smad6-203ENSMUST00000179458 273 ntBASIC20.22■□□□□ 0.83
Lhx3P50481 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms