Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a1P31648 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.05■□□□□ 0.32
Slc6a1P31648 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a1P31648 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a1P31648 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.05■□□□□ 0.32
Slc6a1P31648 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a1P31648 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a1P31648 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a1P31648 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.05■□□□□ 0.32
Slc6a1P31648 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a1P31648 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.04■□□□□ 0.32
Slc6a1P31648 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a1P31648 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a1P31648 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a1P31648 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a1P31648 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a1P31648 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Slc6a1P31648 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a1P31648 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Slc6a1P31648 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.04■□□□□ 0.32
Slc6a1P31648 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a1P31648 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Slc6a1P31648 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc6a1P31648 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc6a1P31648 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Slc6a1P31648 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc6a1P31648 Gm5812-201ENSMUST00000061073 957 ntBASIC17.03■□□□□ 0.32
Slc6a1P31648 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc6a1P31648 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Slc6a1P31648 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc6a1P31648 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slc6a1P31648 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slc6a1P31648 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slc6a1P31648 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slc6a1P31648 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slc6a1P31648 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
Slc6a1P31648 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slc6a1P31648 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.02■□□□□ 0.32
Slc6a1P31648 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Slc6a1P31648 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Slc6a1P31648 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Slc6a1P31648 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc6a1P31648 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc6a1P31648 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Slc6a1P31648 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Slc6a1P31648 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.01■□□□□ 0.31
Slc6a1P31648 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.01■□□□□ 0.31
Slc6a1P31648 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Slc6a1P31648 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc6a1P31648 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Slc6a1P31648 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc6a1P31648 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Slc6a1P31648 Gm43231-201ENSMUST00000202960 2258 ntBASIC17■□□□□ 0.31
Slc6a1P31648 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Slc6a1P31648 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17■□□□□ 0.31
Slc6a1P31648 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Slc6a1P31648 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Slc6a1P31648 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Slc6a1P31648 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Slc6a1P31648 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17■□□□□ 0.31
Slc6a1P31648 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17■□□□□ 0.31
Slc6a1P31648 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Slc6a1P31648 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Slc6a1P31648 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Slc6a1P31648 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Slc6a1P31648 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Slc6a1P31648 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Slc6a1P31648 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Slc6a1P31648 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Slc6a1P31648 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc6a1P31648 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
Slc6a1P31648 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc6a1P31648 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc6a1P31648 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc6a1P31648 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc6a1P31648 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Slc6a1P31648 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.99■□□□□ 0.31
Slc6a1P31648 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc6a1P31648 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc6a1P31648 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc6a1P31648 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.99■□□□□ 0.31
Slc6a1P31648 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Slc6a1P31648 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc6a1P31648 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Slc6a1P31648 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc6a1P31648 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Slc6a1P31648 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Slc6a1P31648 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Slc6a1P31648 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.98■□□□□ 0.31
Slc6a1P31648 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Slc6a1P31648 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc6a1P31648 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Slc6a1P31648 Gm43566-201ENSMUST00000196851 808 ntBASIC16.98■□□□□ 0.31
Slc6a1P31648 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC16.98■□□□□ 0.31
Slc6a1P31648 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc6a1P31648 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc6a1P31648 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Slc6a1P31648 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc6a1P31648 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc6a1P31648 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms