Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.07■□□□□ 0.48
Cd40P27512 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.07■□□□□ 0.48
Cd40P27512 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cd40P27512 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cd40P27512 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cd40P27512 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cd40P27512 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.07■□□□□ 0.48
Cd40P27512 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cd40P27512 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cd40P27512 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cd40P27512 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Cd40P27512 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cd40P27512 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cd40P27512 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Cd40P27512 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cd40P27512 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Cd40P27512 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cd40P27512 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cd40P27512 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cd40P27512 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Cd40P27512 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cd40P27512 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cd40P27512 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cd40P27512 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.05■□□□□ 0.48
Cd40P27512 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cd40P27512 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Cd40P27512 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cd40P27512 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.05■□□□□ 0.48
Cd40P27512 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cd40P27512 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Cd40P27512 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cd40P27512 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cd40P27512 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Cd40P27512 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
Cd40P27512 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cd40P27512 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cd40P27512 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Cd40P27512 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cd40P27512 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cd40P27512 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Cd40P27512 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.04■□□□□ 0.48
Cd40P27512 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cd40P27512 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cd40P27512 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cd40P27512 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Cd40P27512 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cd40P27512 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cd40P27512 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.03■□□□□ 0.48
Cd40P27512 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Cd40P27512 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.03■□□□□ 0.48
Cd40P27512 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cd40P27512 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cd40P27512 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cd40P27512 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cd40P27512 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.03■□□□□ 0.48
Cd40P27512 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cd40P27512 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cd40P27512 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cd40P27512 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.02■□□□□ 0.48
Cd40P27512 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cd40P27512 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
Cd40P27512 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cd40P27512 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cd40P27512 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Cd40P27512 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cd40P27512 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cd40P27512 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cd40P27512 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
Cd40P27512 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cd40P27512 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.01■□□□□ 0.47
Cd40P27512 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.01■□□□□ 0.47
Cd40P27512 Gm43137-201ENSMUST00000198052 594 ntBASIC18.01■□□□□ 0.47
Cd40P27512 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.01■□□□□ 0.47
Cd40P27512 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cd40P27512 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cd40P27512 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cd40P27512 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cd40P27512 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cd40P27512 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cd40P27512 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cd40P27512 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cd40P27512 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cd40P27512 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cd40P27512 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18■□□□□ 0.47
Cd40P27512 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Cd40P27512 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Cd40P27512 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cd40P27512 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cd40P27512 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cd40P27512 Gm12821-201ENSMUST00000120022 600 ntBASIC18■□□□□ 0.47
Cd40P27512 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cd40P27512 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18■□□□□ 0.47
Cd40P27512 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cd40P27512 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cd40P27512 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cd40P27512 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cd40P27512 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cd40P27512 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cd40P27512 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cd40P27512 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms