Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 Gm43060-201ENSMUST00000200621 289 ntBASIC20.27■□□□□ 0.84
Sp1O89090 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Sp1O89090 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Sp1O89090 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Sp1O89090 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sp1O89090 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sp1O89090 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sp1O89090 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.26■□□□□ 0.83
Sp1O89090 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sp1O89090 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sp1O89090 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
Sp1O89090 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Sp1O89090 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sp1O89090 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Sp1O89090 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.25■□□□□ 0.83
Sp1O89090 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sp1O89090 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sp1O89090 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sp1O89090 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.25■□□□□ 0.83
Sp1O89090 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sp1O89090 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sp1O89090 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sp1O89090 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sp1O89090 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sp1O89090 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sp1O89090 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sp1O89090 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Sp1O89090 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Sp1O89090 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sp1O89090 Gm18284-201ENSMUST00000172604 624 ntBASIC20.23■□□□□ 0.83
Sp1O89090 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sp1O89090 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.23■□□□□ 0.83
Sp1O89090 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sp1O89090 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.23■□□□□ 0.83
Sp1O89090 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Sp1O89090 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sp1O89090 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sp1O89090 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sp1O89090 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sp1O89090 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Sp1O89090 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sp1O89090 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Sp1O89090 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sp1O89090 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sp1O89090 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sp1O89090 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sp1O89090 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.2■□□□□ 0.82
Sp1O89090 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sp1O89090 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sp1O89090 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sp1O89090 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sp1O89090 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Sp1O89090 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sp1O89090 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Sp1O89090 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.19■□□□□ 0.82
Sp1O89090 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.19■□□□□ 0.82
Sp1O89090 Gm8495-201ENSMUST00000188740 694 ntBASIC20.19■□□□□ 0.82
Sp1O89090 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Sp1O89090 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sp1O89090 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Sp1O89090 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sp1O89090 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Sp1O89090 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Sp1O89090 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sp1O89090 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sp1O89090 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sp1O89090 Gm11421-201ENSMUST00000122124 294 ntBASIC20.18■□□□□ 0.82
Sp1O89090 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sp1O89090 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.18■□□□□ 0.82
Sp1O89090 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sp1O89090 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.18■□□□□ 0.82
Sp1O89090 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.18■□□□□ 0.82
Sp1O89090 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sp1O89090 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sp1O89090 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sp1O89090 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.18■□□□□ 0.82
Sp1O89090 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Sp1O89090 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.17■□□□□ 0.82
Sp1O89090 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sp1O89090 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sp1O89090 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Sp1O89090 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sp1O89090 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Sp1O89090 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.17■□□□□ 0.82
Sp1O89090 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sp1O89090 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sp1O89090 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sp1O89090 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sp1O89090 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sp1O89090 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.16■□□□□ 0.82
Sp1O89090 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sp1O89090 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sp1O89090 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Sp1O89090 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sp1O89090 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.15■□□□□ 0.82
Sp1O89090 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Sp1O89090 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.15■□□□□ 0.82
Sp1O89090 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sp1O89090 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.15■□□□□ 0.82
Sp1O89090 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms