Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.64■□□□□ 0.57
Cx3cl1O35188 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cx3cl1O35188 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.64■□□□□ 0.57
Cx3cl1O35188 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cx3cl1O35188 Mir6236-201ENSMUST00000184437 123 ntBASIC18.64■□□□□ 0.57
Cx3cl1O35188 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cx3cl1O35188 Gm43137-201ENSMUST00000198052 594 ntBASIC18.64■□□□□ 0.57
Cx3cl1O35188 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cx3cl1O35188 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cx3cl1O35188 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cx3cl1O35188 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cx3cl1O35188 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Cx3cl1O35188 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
Cx3cl1O35188 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cx3cl1O35188 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cx3cl1O35188 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Cx3cl1O35188 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Cx3cl1O35188 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cx3cl1O35188 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Cx3cl1O35188 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cx3cl1O35188 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.63■□□□□ 0.57
Cx3cl1O35188 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Cx3cl1O35188 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cx3cl1O35188 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Cx3cl1O35188 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Cx3cl1O35188 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cx3cl1O35188 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.62■□□□□ 0.57
Cx3cl1O35188 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cx3cl1O35188 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cx3cl1O35188 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.62■□□□□ 0.57
Cx3cl1O35188 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.62■□□□□ 0.57
Cx3cl1O35188 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
Cx3cl1O35188 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cx3cl1O35188 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cx3cl1O35188 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Cx3cl1O35188 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cx3cl1O35188 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Cx3cl1O35188 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Cx3cl1O35188 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cx3cl1O35188 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cx3cl1O35188 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cx3cl1O35188 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.61■□□□□ 0.57
Cx3cl1O35188 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.61■□□□□ 0.57
Cx3cl1O35188 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cx3cl1O35188 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cx3cl1O35188 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cx3cl1O35188 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cx3cl1O35188 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cx3cl1O35188 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cx3cl1O35188 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cx3cl1O35188 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cx3cl1O35188 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Cx3cl1O35188 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cx3cl1O35188 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cx3cl1O35188 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Cx3cl1O35188 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.6■□□□□ 0.57
Cx3cl1O35188 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cx3cl1O35188 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cx3cl1O35188 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cx3cl1O35188 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cx3cl1O35188 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cx3cl1O35188 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cx3cl1O35188 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cx3cl1O35188 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cx3cl1O35188 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cx3cl1O35188 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cx3cl1O35188 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cx3cl1O35188 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cx3cl1O35188 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Cx3cl1O35188 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cx3cl1O35188 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cx3cl1O35188 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cx3cl1O35188 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cx3cl1O35188 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.58■□□□□ 0.57
Cx3cl1O35188 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cx3cl1O35188 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cx3cl1O35188 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cx3cl1O35188 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cx3cl1O35188 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cx3cl1O35188 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cx3cl1O35188 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cx3cl1O35188 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.58■□□□□ 0.56
Cx3cl1O35188 Gm45417-201ENSMUST00000209533 758 ntBASIC18.58■□□□□ 0.56
Cx3cl1O35188 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cx3cl1O35188 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Cx3cl1O35188 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Cx3cl1O35188 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cx3cl1O35188 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cx3cl1O35188 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cx3cl1O35188 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cx3cl1O35188 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cx3cl1O35188 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Cx3cl1O35188 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cx3cl1O35188 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cx3cl1O35188 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Cx3cl1O35188 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cx3cl1O35188 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Cx3cl1O35188 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Cx3cl1O35188 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cx3cl1O35188 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms