Protein–RNA interactions for Protein: O35126

Atn1, Atrophin-1, mousemouse

Predictions only

Length 1,175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atn1O35126 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atn1O35126 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Atn1O35126 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.44■□□□□ 0.7
Atn1O35126 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.44■□□□□ 0.7
Atn1O35126 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atn1O35126 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Atn1O35126 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.44■□□□□ 0.7
Atn1O35126 Gm40881-201ENSMUST00000223397 166 ntBASIC19.44■□□□□ 0.7
Atn1O35126 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atn1O35126 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atn1O35126 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Atn1O35126 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.44■□□□□ 0.7
Atn1O35126 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Atn1O35126 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atn1O35126 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Atn1O35126 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atn1O35126 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atn1O35126 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.43■□□□□ 0.7
Atn1O35126 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.43■□□□□ 0.7
Atn1O35126 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atn1O35126 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atn1O35126 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atn1O35126 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atn1O35126 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Atn1O35126 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atn1O35126 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atn1O35126 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Atn1O35126 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atn1O35126 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atn1O35126 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atn1O35126 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Atn1O35126 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Atn1O35126 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atn1O35126 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atn1O35126 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.41■□□□□ 0.7
Atn1O35126 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atn1O35126 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atn1O35126 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
Atn1O35126 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Atn1O35126 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atn1O35126 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atn1O35126 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Atn1O35126 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.4■□□□□ 0.7
Atn1O35126 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Atn1O35126 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atn1O35126 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atn1O35126 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Atn1O35126 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Atn1O35126 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atn1O35126 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Atn1O35126 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atn1O35126 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.39■□□□□ 0.69
Atn1O35126 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.39■□□□□ 0.69
Atn1O35126 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atn1O35126 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atn1O35126 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Atn1O35126 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Atn1O35126 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Atn1O35126 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.38■□□□□ 0.69
Atn1O35126 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atn1O35126 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.38■□□□□ 0.69
Atn1O35126 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.37■□□□□ 0.69
Atn1O35126 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Atn1O35126 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.37■□□□□ 0.69
Atn1O35126 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atn1O35126 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atn1O35126 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Atn1O35126 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atn1O35126 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atn1O35126 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Atn1O35126 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Atn1O35126 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atn1O35126 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atn1O35126 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atn1O35126 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atn1O35126 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Atn1O35126 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Atn1O35126 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atn1O35126 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.36■□□□□ 0.69
Atn1O35126 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Atn1O35126 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atn1O35126 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atn1O35126 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atn1O35126 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atn1O35126 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atn1O35126 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Atn1O35126 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atn1O35126 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Atn1O35126 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atn1O35126 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atn1O35126 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Atn1O35126 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Atn1O35126 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.35■□□□□ 0.69
Atn1O35126 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atn1O35126 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Atn1O35126 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atn1O35126 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atn1O35126 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atn1O35126 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Atn1O35126 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms