Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfrsf11bO08712 Gm15546-201ENSMUST00000122095 826 ntBASIC20.26■□□□□ 0.83
Tnfrsf11bO08712 Gm43530-201ENSMUST00000195920 274 ntBASIC20.26■□□□□ 0.83
Tnfrsf11bO08712 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfrsf11bO08712 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfrsf11bO08712 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfrsf11bO08712 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfrsf11bO08712 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfrsf11bO08712 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfrsf11bO08712 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfrsf11bO08712 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfrsf11bO08712 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfrsf11bO08712 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfrsf11bO08712 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfrsf11bO08712 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.25■□□□□ 0.83
Tnfrsf11bO08712 Mir6236-201ENSMUST00000184437 123 ntBASIC20.25■□□□□ 0.83
Tnfrsf11bO08712 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.25■□□□□ 0.83
Tnfrsf11bO08712 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Tnfrsf11bO08712 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
Tnfrsf11bO08712 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfrsf11bO08712 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfrsf11bO08712 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfrsf11bO08712 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfrsf11bO08712 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfrsf11bO08712 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfrsf11bO08712 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfrsf11bO08712 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.24■□□□□ 0.83
Tnfrsf11bO08712 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfrsf11bO08712 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.24■□□□□ 0.83
Tnfrsf11bO08712 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfrsf11bO08712 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfrsf11bO08712 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.24■□□□□ 0.83
Tnfrsf11bO08712 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Tnfrsf11bO08712 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Tnfrsf11bO08712 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfrsf11bO08712 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfrsf11bO08712 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Tnfrsf11bO08712 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfrsf11bO08712 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfrsf11bO08712 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfrsf11bO08712 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfrsf11bO08712 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfrsf11bO08712 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfrsf11bO08712 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tnfrsf11bO08712 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Tnfrsf11bO08712 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.22■□□□□ 0.83
Tnfrsf11bO08712 Etf1-202ENSMUST00000180351 108 ntBASIC20.22■□□□□ 0.83
Tnfrsf11bO08712 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tnfrsf11bO08712 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tnfrsf11bO08712 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.21■□□□□ 0.83
Tnfrsf11bO08712 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfrsf11bO08712 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.21■□□□□ 0.83
Tnfrsf11bO08712 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Tnfrsf11bO08712 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfrsf11bO08712 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfrsf11bO08712 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfrsf11bO08712 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfrsf11bO08712 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfrsf11bO08712 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Tnfrsf11bO08712 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfrsf11bO08712 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Tnfrsf11bO08712 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfrsf11bO08712 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfrsf11bO08712 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfrsf11bO08712 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Tnfrsf11bO08712 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfrsf11bO08712 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
Tnfrsf11bO08712 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Tnfrsf11bO08712 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfrsf11bO08712 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfrsf11bO08712 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfrsf11bO08712 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfrsf11bO08712 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Tnfrsf11bO08712 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfrsf11bO08712 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfrsf11bO08712 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.18■□□□□ 0.82
Tnfrsf11bO08712 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfrsf11bO08712 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Tnfrsf11bO08712 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfrsf11bO08712 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfrsf11bO08712 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Tnfrsf11bO08712 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfrsf11bO08712 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfrsf11bO08712 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfrsf11bO08712 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.18■□□□□ 0.82
Tnfrsf11bO08712 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfrsf11bO08712 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnfrsf11bO08712 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnfrsf11bO08712 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tnfrsf11bO08712 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tnfrsf11bO08712 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnfrsf11bO08712 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnfrsf11bO08712 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.17■□□□□ 0.82
Tnfrsf11bO08712 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tnfrsf11bO08712 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Tnfrsf11bO08712 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tnfrsf11bO08712 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnfrsf11bO08712 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Tnfrsf11bO08712 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnfrsf11bO08712 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms