Protein–RNA interactions for Protein: E9PY46

Ift140, Intraflagellar transport protein 140 homolog, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift140E9PY46 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC32.32■■■□□ 2.76
Ift140E9PY46 CT030146.1-201ENSMUST00000220919 217 ntBASIC32.32■■■□□ 2.76
Ift140E9PY46 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC32.32■■■□□ 2.76
Ift140E9PY46 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC32.31■■■□□ 2.76
Ift140E9PY46 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Ift140E9PY46 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Ift140E9PY46 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Ift140E9PY46 Gm44878-201ENSMUST00000205812 1295 ntBASIC32.3■■■□□ 2.76
Ift140E9PY46 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Ift140E9PY46 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Ift140E9PY46 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC32.29■■■□□ 2.76
Ift140E9PY46 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC32.29■■■□□ 2.76
Ift140E9PY46 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Ift140E9PY46 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC32.29■■■□□ 2.76
Ift140E9PY46 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
Ift140E9PY46 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC32.29■■■□□ 2.76
Ift140E9PY46 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC32.28■■■□□ 2.76
Ift140E9PY46 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC32.28■■■□□ 2.76
Ift140E9PY46 Gm26524-201ENSMUST00000192339 390 ntBASIC32.28■■■□□ 2.76
Ift140E9PY46 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
Ift140E9PY46 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC32.28■■■□□ 2.76
Ift140E9PY46 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Ift140E9PY46 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC32.27■■■□□ 2.76
Ift140E9PY46 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC32.27■■■□□ 2.76
Ift140E9PY46 Trmt13-210ENSMUST00000198454 880 ntBASIC32.27■■■□□ 2.76
Ift140E9PY46 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC32.27■■■□□ 2.76
Ift140E9PY46 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC32.26■■■□□ 2.76
Ift140E9PY46 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
Ift140E9PY46 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Ift140E9PY46 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
Ift140E9PY46 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Ift140E9PY46 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
Ift140E9PY46 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC32.25■■■□□ 2.75
Ift140E9PY46 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Ift140E9PY46 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC32.25■■■□□ 2.75
Ift140E9PY46 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
Ift140E9PY46 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC32.24■■■□□ 2.75
Ift140E9PY46 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC32.24■■■□□ 2.75
Ift140E9PY46 Gm6365-201ENSMUST00000054711 744 ntBASIC32.24■■■□□ 2.75
Ift140E9PY46 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Ift140E9PY46 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
Ift140E9PY46 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC32.24■■■□□ 2.75
Ift140E9PY46 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Ift140E9PY46 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC32.23■■■□□ 2.75
Ift140E9PY46 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
Ift140E9PY46 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Ift140E9PY46 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Ift140E9PY46 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC32.23■■■□□ 2.75
Ift140E9PY46 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
Ift140E9PY46 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC32.23■■■□□ 2.75
Ift140E9PY46 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC32.23■■■□□ 2.75
Ift140E9PY46 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Ift140E9PY46 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Ift140E9PY46 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Ift140E9PY46 Gm10655-201ENSMUST00000098658 1397 ntBASIC32.22■■■□□ 2.75
Ift140E9PY46 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Ift140E9PY46 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Ift140E9PY46 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
Ift140E9PY46 Gm13836-201ENSMUST00000121159 501 ntBASIC32.22■■■□□ 2.75
Ift140E9PY46 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC32.21■■■□□ 2.75
Ift140E9PY46 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Ift140E9PY46 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC32.2■■■□□ 2.75
Ift140E9PY46 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
Ift140E9PY46 AC130671.1-201ENSMUST00000227384 1237 ntBASIC32.2■■■□□ 2.75
Ift140E9PY46 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Ift140E9PY46 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
Ift140E9PY46 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
Ift140E9PY46 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC32.2■■■□□ 2.74
Ift140E9PY46 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
Ift140E9PY46 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC32.2■■■□□ 2.74
Ift140E9PY46 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Ift140E9PY46 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC32.19■■■□□ 2.74
Ift140E9PY46 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC32.19■■■□□ 2.74
Ift140E9PY46 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC32.19■■■□□ 2.74
Ift140E9PY46 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Ift140E9PY46 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Ift140E9PY46 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC32.18■■■□□ 2.74
Ift140E9PY46 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC32.17■■■□□ 2.74
Ift140E9PY46 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC32.17■■■□□ 2.74
Ift140E9PY46 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Ift140E9PY46 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
Ift140E9PY46 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
Ift140E9PY46 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
Ift140E9PY46 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC32.16■■■□□ 2.74
Ift140E9PY46 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Ift140E9PY46 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC32.15■■■□□ 2.74
Ift140E9PY46 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Ift140E9PY46 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Ift140E9PY46 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC32.15■■■□□ 2.74
Ift140E9PY46 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC32.15■■■□□ 2.74
Ift140E9PY46 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Ift140E9PY46 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC32.14■■■□□ 2.74
Ift140E9PY46 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Ift140E9PY46 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC32.14■■■□□ 2.74
Ift140E9PY46 Gm6420-201ENSMUST00000193885 723 ntBASIC32.14■■■□□ 2.74
Ift140E9PY46 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC32.14■■■□□ 2.74
Ift140E9PY46 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Ift140E9PY46 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Ift140E9PY46 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
Ift140E9PY46 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms