Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm28043E0CXC2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm28043E0CXC2 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm28043E0CXC2 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm28043E0CXC2 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Gm28043E0CXC2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm28043E0CXC2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm28043E0CXC2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm28043E0CXC2 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Gm28043E0CXC2 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm28043E0CXC2 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm28043E0CXC2 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Gm28043E0CXC2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm28043E0CXC2 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm28043E0CXC2 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm28043E0CXC2 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm28043E0CXC2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.84■□□□□ 0.77
Gm28043E0CXC2 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm28043E0CXC2 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm28043E0CXC2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.84■□□□□ 0.77
Gm28043E0CXC2 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm28043E0CXC2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Gm28043E0CXC2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm28043E0CXC2 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm28043E0CXC2 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.83■□□□□ 0.77
Gm28043E0CXC2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Gm28043E0CXC2 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Gm28043E0CXC2 Gm9959-201ENSMUST00000068277 390 ntBASIC19.83■□□□□ 0.77
Gm28043E0CXC2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Gm28043E0CXC2 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.83■□□□□ 0.76
Gm28043E0CXC2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Gm28043E0CXC2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Gm28043E0CXC2 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm28043E0CXC2 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm28043E0CXC2 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm28043E0CXC2 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm28043E0CXC2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm28043E0CXC2 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.82■□□□□ 0.76
Gm28043E0CXC2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm28043E0CXC2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.82■□□□□ 0.76
Gm28043E0CXC2 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.82■□□□□ 0.76
Gm28043E0CXC2 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm28043E0CXC2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
Gm28043E0CXC2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm28043E0CXC2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm28043E0CXC2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm28043E0CXC2 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.81■□□□□ 0.76
Gm28043E0CXC2 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm28043E0CXC2 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm28043E0CXC2 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Gm28043E0CXC2 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm28043E0CXC2 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm28043E0CXC2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm28043E0CXC2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Gm28043E0CXC2 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm28043E0CXC2 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Gm28043E0CXC2 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm28043E0CXC2 Gm7417-201ENSMUST00000192950 473 ntBASIC19.8■□□□□ 0.76
Gm28043E0CXC2 Gm45102-201ENSMUST00000207427 857 ntBASIC19.8■□□□□ 0.76
Gm28043E0CXC2 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm28043E0CXC2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm28043E0CXC2 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Gm28043E0CXC2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Gm28043E0CXC2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.79■□□□□ 0.76
Gm28043E0CXC2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Gm28043E0CXC2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.79■□□□□ 0.76
Gm28043E0CXC2 Etf1-202ENSMUST00000180351 108 ntBASIC19.79■□□□□ 0.76
Gm28043E0CXC2 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.79■□□□□ 0.76
Gm28043E0CXC2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Gm28043E0CXC2 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Gm28043E0CXC2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm28043E0CXC2 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm28043E0CXC2 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.78■□□□□ 0.76
Gm28043E0CXC2 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm28043E0CXC2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm28043E0CXC2 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm28043E0CXC2 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Gm28043E0CXC2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm28043E0CXC2 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Gm28043E0CXC2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.78■□□□□ 0.76
Gm28043E0CXC2 Rps24-207ENSMUST00000224568 714 ntBASIC19.78■□□□□ 0.76
Gm28043E0CXC2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm28043E0CXC2 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Gm28043E0CXC2 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm28043E0CXC2 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Gm28043E0CXC2 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gm28043E0CXC2 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gm28043E0CXC2 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gm28043E0CXC2 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.77■□□□□ 0.76
Gm28043E0CXC2 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gm28043E0CXC2 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gm28043E0CXC2 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gm28043E0CXC2 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Gm28043E0CXC2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Gm28043E0CXC2 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.77■□□□□ 0.75
Gm28043E0CXC2 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.76■□□□□ 0.75
Gm28043E0CXC2 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Gm28043E0CXC2 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm28043E0CXC2 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.76■□□□□ 0.75
Gm28043E0CXC2 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms