Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Rfx8D3YU81 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Rfx8D3YU81 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.09■□□□□ 0.97
Rfx8D3YU81 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rfx8D3YU81 Mir6236-201ENSMUST00000184437 123 ntBASIC21.09■□□□□ 0.97
Rfx8D3YU81 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Rfx8D3YU81 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rfx8D3YU81 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rfx8D3YU81 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Rfx8D3YU81 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rfx8D3YU81 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rfx8D3YU81 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rfx8D3YU81 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.08■□□□□ 0.96
Rfx8D3YU81 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Rfx8D3YU81 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rfx8D3YU81 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rfx8D3YU81 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rfx8D3YU81 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.07■□□□□ 0.96
Rfx8D3YU81 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.07■□□□□ 0.96
Rfx8D3YU81 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rfx8D3YU81 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rfx8D3YU81 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rfx8D3YU81 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rfx8D3YU81 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rfx8D3YU81 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rfx8D3YU81 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rfx8D3YU81 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rfx8D3YU81 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rfx8D3YU81 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rfx8D3YU81 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rfx8D3YU81 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.06■□□□□ 0.96
Rfx8D3YU81 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rfx8D3YU81 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rfx8D3YU81 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rfx8D3YU81 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Rfx8D3YU81 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rfx8D3YU81 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.05■□□□□ 0.96
Rfx8D3YU81 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rfx8D3YU81 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Rfx8D3YU81 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rfx8D3YU81 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rfx8D3YU81 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rfx8D3YU81 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rfx8D3YU81 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rfx8D3YU81 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rfx8D3YU81 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rfx8D3YU81 Gm21956-201ENSMUST00000179946 522 ntBASIC21.04■□□□□ 0.96
Rfx8D3YU81 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rfx8D3YU81 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rfx8D3YU81 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rfx8D3YU81 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rfx8D3YU81 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rfx8D3YU81 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.04■□□□□ 0.96
Rfx8D3YU81 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rfx8D3YU81 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rfx8D3YU81 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rfx8D3YU81 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.03■□□□□ 0.96
Rfx8D3YU81 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rfx8D3YU81 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.03■□□□□ 0.96
Rfx8D3YU81 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rfx8D3YU81 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.03■□□□□ 0.96
Rfx8D3YU81 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rfx8D3YU81 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rfx8D3YU81 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rfx8D3YU81 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rfx8D3YU81 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.02■□□□□ 0.96
Rfx8D3YU81 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.02■□□□□ 0.96
Rfx8D3YU81 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rfx8D3YU81 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Rfx8D3YU81 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rfx8D3YU81 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.02■□□□□ 0.96
Rfx8D3YU81 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Rfx8D3YU81 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Rfx8D3YU81 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Rfx8D3YU81 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rfx8D3YU81 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rfx8D3YU81 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rfx8D3YU81 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rfx8D3YU81 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rfx8D3YU81 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rfx8D3YU81 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rfx8D3YU81 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rfx8D3YU81 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rfx8D3YU81 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rfx8D3YU81 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Rfx8D3YU81 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.01■□□□□ 0.95
Rfx8D3YU81 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rfx8D3YU81 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rfx8D3YU81 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rfx8D3YU81 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rfx8D3YU81 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Rfx8D3YU81 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rfx8D3YU81 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rfx8D3YU81 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21■□□□□ 0.95
Rfx8D3YU81 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Rfx8D3YU81 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rfx8D3YU81 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rfx8D3YU81 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rfx8D3YU81 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Rfx8D3YU81 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms