Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav13n-4A0A0G2JG01 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.16
Trav13n-4A0A0G2JG01 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav13n-4A0A0G2JG01 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav13n-4A0A0G2JG01 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Trav13n-4A0A0G2JG01 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav13n-4A0A0G2JG01 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav13n-4A0A0G2JG01 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav13n-4A0A0G2JG01 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav13n-4A0A0G2JG01 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Trav13n-4A0A0G2JG01 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13n-4A0A0G2JG01 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13n-4A0A0G2JG01 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13n-4A0A0G2JG01 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13n-4A0A0G2JG01 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13n-4A0A0G2JG01 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13n-4A0A0G2JG01 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13n-4A0A0G2JG01 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.07■□□□□ 0.16
Trav13n-4A0A0G2JG01 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
Trav13n-4A0A0G2JG01 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.07■□□□□ 0.16
Trav13n-4A0A0G2JG01 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trav13n-4A0A0G2JG01 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13n-4A0A0G2JG01 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13n-4A0A0G2JG01 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13n-4A0A0G2JG01 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13n-4A0A0G2JG01 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13n-4A0A0G2JG01 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav13n-4A0A0G2JG01 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trav13n-4A0A0G2JG01 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav13n-4A0A0G2JG01 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav13n-4A0A0G2JG01 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.06■□□□□ 0.16
Trav13n-4A0A0G2JG01 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav13n-4A0A0G2JG01 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav13n-4A0A0G2JG01 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trav13n-4A0A0G2JG01 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trav13n-4A0A0G2JG01 Golph3-202ENSMUST00000226517 2359 ntBASIC16.06■□□□□ 0.16
Trav13n-4A0A0G2JG01 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav13n-4A0A0G2JG01 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav13n-4A0A0G2JG01 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.05■□□□□ 0.16
Trav13n-4A0A0G2JG01 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav13n-4A0A0G2JG01 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav13n-4A0A0G2JG01 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.05■□□□□ 0.16
Trav13n-4A0A0G2JG01 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav13n-4A0A0G2JG01 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav13n-4A0A0G2JG01 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav13n-4A0A0G2JG01 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav13n-4A0A0G2JG01 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav13n-4A0A0G2JG01 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav13n-4A0A0G2JG01 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav13n-4A0A0G2JG01 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Trav13n-4A0A0G2JG01 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav13n-4A0A0G2JG01 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav13n-4A0A0G2JG01 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13n-4A0A0G2JG01 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13n-4A0A0G2JG01 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trav13n-4A0A0G2JG01 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.04■□□□□ 0.16
Trav13n-4A0A0G2JG01 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13n-4A0A0G2JG01 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav13n-4A0A0G2JG01 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trav13n-4A0A0G2JG01 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13n-4A0A0G2JG01 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13n-4A0A0G2JG01 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13n-4A0A0G2JG01 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13n-4A0A0G2JG01 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13n-4A0A0G2JG01 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav13n-4A0A0G2JG01 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13n-4A0A0G2JG01 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trav13n-4A0A0G2JG01 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13n-4A0A0G2JG01 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13n-4A0A0G2JG01 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Trav13n-4A0A0G2JG01 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13n-4A0A0G2JG01 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav13n-4A0A0G2JG01 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav13n-4A0A0G2JG01 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav13n-4A0A0G2JG01 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.03■□□□□ 0.16
Trav13n-4A0A0G2JG01 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav13n-4A0A0G2JG01 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.03■□□□□ 0.16
Trav13n-4A0A0G2JG01 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Trav13n-4A0A0G2JG01 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.03■□□□□ 0.16
Trav13n-4A0A0G2JG01 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Trav13n-4A0A0G2JG01 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trav13n-4A0A0G2JG01 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav13n-4A0A0G2JG01 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav13n-4A0A0G2JG01 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav13n-4A0A0G2JG01 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC16.02■□□□□ 0.16
Trav13n-4A0A0G2JG01 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Trav13n-4A0A0G2JG01 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav13n-4A0A0G2JG01 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav13n-4A0A0G2JG01 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav13n-4A0A0G2JG01 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav13n-4A0A0G2JG01 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav13n-4A0A0G2JG01 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav13n-4A0A0G2JG01 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav13n-4A0A0G2JG01 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav13n-4A0A0G2JG01 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trav13n-4A0A0G2JG01 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav13n-4A0A0G2JG01 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav13n-4A0A0G2JG01 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav13n-4A0A0G2JG01 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.01■□□□□ 0.15
Trav13n-4A0A0G2JG01 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms