Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6n-6A0A075B6B2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6n-6A0A075B6B2 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6n-6A0A075B6B2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6n-6A0A075B6B2 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Trav6n-6A0A075B6B2 Gm13238-201ENSMUST00000117655 780 ntBASIC14.74□□□□□ -0.05
Trav6n-6A0A075B6B2 Gm16464-201ENSMUST00000117815 1095 ntBASIC14.74□□□□□ -0.05
Trav6n-6A0A075B6B2 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Trav6n-6A0A075B6B2 Gm5812-201ENSMUST00000061073 957 ntBASIC14.74□□□□□ -0.05
Trav6n-6A0A075B6B2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6n-6A0A075B6B2 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6n-6A0A075B6B2 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6n-6A0A075B6B2 Gm44949-201ENSMUST00000206423 1450 ntBASIC14.74□□□□□ -0.05
Trav6n-6A0A075B6B2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6n-6A0A075B6B2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trav6n-6A0A075B6B2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trav6n-6A0A075B6B2 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav6n-6A0A075B6B2 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6n-6A0A075B6B2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6n-6A0A075B6B2 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6n-6A0A075B6B2 Gm10232-201ENSMUST00000089221 720 ntBASIC14.73□□□□□ -0.05
Trav6n-6A0A075B6B2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav6n-6A0A075B6B2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6n-6A0A075B6B2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6n-6A0A075B6B2 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Trav6n-6A0A075B6B2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6n-6A0A075B6B2 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6n-6A0A075B6B2 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC14.72□□□□□ -0.05
Trav6n-6A0A075B6B2 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6n-6A0A075B6B2 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC14.72□□□□□ -0.05
Trav6n-6A0A075B6B2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trav6n-6A0A075B6B2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6n-6A0A075B6B2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6n-6A0A075B6B2 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6n-6A0A075B6B2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC14.72□□□□□ -0.05
Trav6n-6A0A075B6B2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6n-6A0A075B6B2 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6n-6A0A075B6B2 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6n-6A0A075B6B2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6n-6A0A075B6B2 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6n-6A0A075B6B2 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6n-6A0A075B6B2 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trav6n-6A0A075B6B2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6n-6A0A075B6B2 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC14.71□□□□□ -0.05
Trav6n-6A0A075B6B2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6n-6A0A075B6B2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6n-6A0A075B6B2 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6n-6A0A075B6B2 Gm15546-201ENSMUST00000122095 826 ntBASIC14.71□□□□□ -0.05
Trav6n-6A0A075B6B2 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6n-6A0A075B6B2 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6n-6A0A075B6B2 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC14.71□□□□□ -0.05
Trav6n-6A0A075B6B2 Gm18755-201ENSMUST00000218030 1099 ntBASIC14.71□□□□□ -0.05
Trav6n-6A0A075B6B2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trav6n-6A0A075B6B2 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6n-6A0A075B6B2 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trav6n-6A0A075B6B2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.71□□□□□ -0.05
Trav6n-6A0A075B6B2 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav6n-6A0A075B6B2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav6n-6A0A075B6B2 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Trav6n-6A0A075B6B2 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav6n-6A0A075B6B2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav6n-6A0A075B6B2 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav6n-6A0A075B6B2 Golph3-205ENSMUST00000228671 2842 ntBASIC14.7□□□□□ -0.06
Trav6n-6A0A075B6B2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6n-6A0A075B6B2 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6n-6A0A075B6B2 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trav6n-6A0A075B6B2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Trav6n-6A0A075B6B2 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.7□□□□□ -0.06
Trav6n-6A0A075B6B2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6n-6A0A075B6B2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6n-6A0A075B6B2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6n-6A0A075B6B2 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC14.7□□□□□ -0.06
Trav6n-6A0A075B6B2 AC116713.1-201ENSMUST00000215074 430 ntBASIC14.7□□□□□ -0.06
Trav6n-6A0A075B6B2 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6n-6A0A075B6B2 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6n-6A0A075B6B2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trav6n-6A0A075B6B2 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6n-6A0A075B6B2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6n-6A0A075B6B2 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6n-6A0A075B6B2 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6n-6A0A075B6B2 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6n-6A0A075B6B2 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6n-6A0A075B6B2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6n-6A0A075B6B2 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6n-6A0A075B6B2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6n-6A0A075B6B2 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trav6n-6A0A075B6B2 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC14.69□□□□□ -0.06
Trav6n-6A0A075B6B2 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC14.69□□□□□ -0.06
Trav6n-6A0A075B6B2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6n-6A0A075B6B2 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6n-6A0A075B6B2 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6n-6A0A075B6B2 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav6n-6A0A075B6B2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trav6n-6A0A075B6B2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Trav6n-6A0A075B6B2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trav6n-6A0A075B6B2 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6n-6A0A075B6B2 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6n-6A0A075B6B2 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trav6n-6A0A075B6B2 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav6n-6A0A075B6B2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms