Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Trav12-3A0A075B648 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12-3A0A075B648 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12-3A0A075B648 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12-3A0A075B648 Gm6627-201ENSMUST00000218299 2386 ntBASIC14.56□□□□□ -0.08
Trav12-3A0A075B648 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12-3A0A075B648 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12-3A0A075B648 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav12-3A0A075B648 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12-3A0A075B648 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12-3A0A075B648 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12-3A0A075B648 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Trav12-3A0A075B648 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC14.56□□□□□ -0.08
Trav12-3A0A075B648 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trav12-3A0A075B648 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav12-3A0A075B648 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav12-3A0A075B648 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC14.55□□□□□ -0.08
Trav12-3A0A075B648 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav12-3A0A075B648 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trav12-3A0A075B648 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav12-3A0A075B648 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav12-3A0A075B648 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav12-3A0A075B648 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav12-3A0A075B648 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav12-3A0A075B648 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav12-3A0A075B648 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav12-3A0A075B648 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav12-3A0A075B648 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav12-3A0A075B648 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav12-3A0A075B648 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav12-3A0A075B648 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Trav12-3A0A075B648 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav12-3A0A075B648 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav12-3A0A075B648 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav12-3A0A075B648 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav12-3A0A075B648 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC14.53□□□□□ -0.08
Trav12-3A0A075B648 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav12-3A0A075B648 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav12-3A0A075B648 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Trav12-3A0A075B648 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav12-3A0A075B648 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav12-3A0A075B648 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav12-3A0A075B648 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav12-3A0A075B648 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav12-3A0A075B648 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav12-3A0A075B648 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Trav12-3A0A075B648 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav12-3A0A075B648 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav12-3A0A075B648 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav12-3A0A075B648 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav12-3A0A075B648 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav12-3A0A075B648 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav12-3A0A075B648 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav12-3A0A075B648 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav12-3A0A075B648 AC122317.2-201ENSMUST00000218708 1248 ntBASIC14.52□□□□□ -0.09
Trav12-3A0A075B648 Terc-201ENSMUST00000082862 423 ntBASIC14.52□□□□□ -0.09
Trav12-3A0A075B648 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Trav12-3A0A075B648 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav12-3A0A075B648 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC14.51□□□□□ -0.09
Trav12-3A0A075B648 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav12-3A0A075B648 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav12-3A0A075B648 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav12-3A0A075B648 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav12-3A0A075B648 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav12-3A0A075B648 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav12-3A0A075B648 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav12-3A0A075B648 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav12-3A0A075B648 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav12-3A0A075B648 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav12-3A0A075B648 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav12-3A0A075B648 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav12-3A0A075B648 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav12-3A0A075B648 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav12-3A0A075B648 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav12-3A0A075B648 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav12-3A0A075B648 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav12-3A0A075B648 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav12-3A0A075B648 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav12-3A0A075B648 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav12-3A0A075B648 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav12-3A0A075B648 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav12-3A0A075B648 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav12-3A0A075B648 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav12-3A0A075B648 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav12-3A0A075B648 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav12-3A0A075B648 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav12-3A0A075B648 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav12-3A0A075B648 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav12-3A0A075B648 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav12-3A0A075B648 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav12-3A0A075B648 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav12-3A0A075B648 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav12-3A0A075B648 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC14.49□□□□□ -0.09
Trav12-3A0A075B648 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav12-3A0A075B648 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav12-3A0A075B648 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav12-3A0A075B648 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav12-3A0A075B648 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav12-3A0A075B648 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav12-3A0A075B648 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms